RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 IRGQQ8WZA9 623 aa8.51□□□□□ -1.05
CTNND1-225ENST00000530094 CENPIQ92674 756 aaPredicted RBP8.51□□□□□ -1.05
CTNND1-225ENST00000530094 SLC24A3Q9HC58 644 aa8.51□□□□□ -1.05
CTNND1-225ENST00000530094 ARHGEF3Q9NR81 526 aa8.51□□□□□ -1.05
CTNND1-225ENST00000530094 ANAPC2Q9UJX6 822 aa8.51□□□□□ -1.05
CTNND1-225ENST00000530094 AGO1Q9UL18 857 aaKnown RBP8.51□□□□□ -1.05
CTNND1-225ENST00000530094 NHSL1Q5SYE7 1610 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 IRGMA1A4Y4 181 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 EFCAB10A6NFE3 127 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 KCNK1O00180 336 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 NBNO60934 754 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 CLDN11O75508 207 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 LYPLA2O95372 231 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 CLPTM1O96005 669 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 NFKB1P19838 968 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 CYP3A5P20815 502 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 PSMB9P28065 219 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 MRPS5P82675 430 aaKnown RBP8.5□□□□□ -1.05
CTNND1-225ENST00000530094 FPGSQ05932 587 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 GRB14Q14449 540 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 NDUFA9Q16795 377 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 AP5B1Q2VPB7 878 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 DGKKQ5KSL6 1271 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 TSHZ1Q6ZSZ6 1077 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 TTC7BQ86TV6 843 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 OR8H2Q8N162 312 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 RORBQ92753 470 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 REXO5Q96IC2 774 aaKnown RBP8.5□□□□□ -1.05
CTNND1-225ENST00000530094 FERD3LQ96RJ6 166 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 CEP41Q9BYV8 373 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 KLQ9UEF7 1012 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 MAFBQ9Y5Q3 323 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ZNF780BQ9Y6R6 833 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 DUSP10Q9Y6W6 482 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ARFGEF2Q9Y6D5 1785 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 EIF4E1BA6NMX2 242 aaKnown RBP8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ARVCFO00192 962 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ITGAXP20702 1163 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 OGNP20774 298 aaKnown RBP8.5□□□□□ -1.05
CTNND1-225ENST00000530094 PSMB4P28070 264 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 TNFRSF8P28908 595 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 CSNK2BP67870 215 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 LGALS3BPQ08380 585 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 MEA1Q16626 185 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 DGUOKQ16854 277 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 OLFML2BQ68BL8 750 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 EFCAB3Q8N7B9 438 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ARHGAP39Q9C0H5 1083 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 IKZF4Q9H2S9 585 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 CLEC4MQ9H2X3 399 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-225ENST00000530094 PHPT1Q9NRX4 125 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-225ENST00000530094 RCOR3Q9P2K3 495 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-225ENST00000530094 IGLV3-22A0A075B6J6 115 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 F8VP50 259 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 FCHO1O14526 889 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 IL1BP01584 269 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 S100GP29377 79 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 MATKP42679 507 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 BNC1Q01954 994 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 PARP15Q460N3 678 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ARCQ7LC44 396 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 DEPDC4Q8N2C3 294 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ZNF276Q8N554 614 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 KLHL23Q8NBE8 558 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 TNFRSF25Q93038 417 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 RNF157Q96PX1 679 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 SEPHS2Q99611 448 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 BRD9Q9H8M2 597 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 SLC9A8Q9Y2E8 581 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 TPP1O14773 563 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 SERPINB7O75635 380 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 TNFAIP8O95379 198 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 HLA-DQA2P01906 255 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 CRATP43155 626 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ACTR3P61158 418 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ITGADQ13349 1161 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 EXOC3L1Q86VI1 746 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ALLCQ8N6M5 410 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 C2orf15Q8WU43 125 aaKnown RBP8.5□□□□□ -1.05
CTNND1-225ENST00000530094 CERS2Q96G23 380 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 ZNF607Q96SK3 696 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 RHBGQ9H310 441 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 HMG20AQ9NP66 347 aa8.5□□□□□ -1.05
CTNND1-225ENST00000530094 MTF2Q9Y483 593 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-225ENST00000530094 CLOCKO15516 846 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 OR6B1O95007 311 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 GJB6O95452 261 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 SMAD3P84022 425 aaKnown RBP8.49□□□□□ -1.05
CTNND1-225ENST00000530094 FAAP100Q0VG06 881 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 BNIP2Q12982 314 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 CBX2Q14781 532 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-225ENST00000530094 ARMC4Q5T2S8 1044 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 PPP2R2DQ66LE6 453 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 POTEHQ6S545 545 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 PIGZQ86VD9 579 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 FAM71AQ8IYT1 594 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 RNF145Q96MT1 663 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 NIFKQ9BYG3 293 aaKnown RBP8.49□□□□□ -1.05
CTNND1-225ENST00000530094 MIR1-1HGQ9H1L0 117 aa8.49□□□□□ -1.05
CTNND1-225ENST00000530094 PCDHB1Q9Y5F3 818 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms