RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 UBXN10Q96LJ8 280 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 ZNF48Q96MX3 618 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.15□□□□□ -1.599e-6■■□□□ 13.2
CSDE1-212ENST00000529046 DNAJC18Q9H819 358 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 PLEKHA2Q9HB19 425 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 PDE11AQ9HCR9 933 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 ARL8BQ9NVJ2 186 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 AATFQ9NY61 560 aaKnown RBP eCLIP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 DTX4Q9Y2E6 619 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 DNAJC16Q9Y2G8 782 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 RABGAP1Q9Y3P9 1069 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 PKP3Q9Y446 797 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 PTPRFP10586 1907 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 LOC285556D6RIA3 1793 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 MGAMO43451 1857 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 SLC22A23A1A5C7 686 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 KCNJ18B7U540 433 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 PPEF2O14830 753 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 DSCR3O14972 297 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 SEPT4O43236 478 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 CREB3O43889 395 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 RNF8O76064 485 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 AKR1A1P14550 325 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 YPEL5P62699 121 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 IRX3P78415 501 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-212ENST00000529046 GABPAQ06546 454 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 TRIP6Q15654 476 aaKnown RBP5.14□□□□□ -1.59
CSDE1-212ENST00000529046 KIAA1755Q5JYT7 1200 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 PXDC1Q5TGL8 231 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 VWA5B1Q5TIE3 1220 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 ADGRA1Q86SQ6 560 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 LRRTM4Q86VH4 590 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 UEVLDQ8IX04 471 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 FSIP1Q8NA03 581 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 AFG1LQ8WV93 481 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 ZSCAN31Q96LW9 406 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-212ENST00000529046 DEFB118Q96PH6 123 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 RIOK1Q9BRS2 568 aaKnown RBP5.14□□□□□ -1.59
CSDE1-212ENST00000529046 TRIM2Q9C040 744 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 SPRTNQ9H040 489 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-212ENST00000529046 CHMP4BQ9H444 224 aaKnown RBP5.14□□□□□ -1.59
CSDE1-212ENST00000529046 TMEM160Q9NX00 188 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 HOXC10Q9NYD6 342 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 ELOVL5Q9NYP7 299 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 DBNLQ9UJU6 430 aaKnown RBP5.14□□□□□ -1.59
CSDE1-212ENST00000529046 BAG5Q9UL15 447 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 AK9Q5TCS8 1911 aa5.14□□□□□ -1.59
CSDE1-212ENST00000529046 ZSWIM8A7E2V4 1837 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 SLC15A5A6NIM6 579 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 NPIPB13A6NJU9 1138 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 C2CD4BA6NLJ0 364 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 NPIPB5A8MRT5 1133 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 NPIPB4C9JG80 1138 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 NCAM2O15394 837 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 STRNO43815 780 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 USP12O75317 370 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 WNT1P04628 370 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 IGKV2-30P06310 120 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 CSF1P09603 554 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 TFEBP19484 476 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 RGS2P41220 211 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 PLCD1P51178 756 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 CCR5P51681 352 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 SLC12A2P55011 1212 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 CCNA1P78396 465 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 CDK18Q07002 472 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 BIRC3Q13489 604 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 LRIT3Q3SXY7 679 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 ANXA2RQ3ZCQ2 193 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 Q4G0T1 1027 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 CTXN3Q4LDR2 81 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 GPR142Q7Z601 462 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 ARL14EPQ8N8R7 260 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-212ENST00000529046 FAM47BQ8NA70 645 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 TRIB2Q92519 343 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 PIGKQ92643 395 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 GOLGA1Q92805 767 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 COQ8BQ96D53 544 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 SIGLEC11Q96RL6 698 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 ABHD14AQ9BUJ0 271 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 CHODLQ9H9P2 273 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 PIH1D3Q9NQM4 214 aaKnown RBP5.13□□□□□ -1.59
CSDE1-212ENST00000529046 TRNAU1APQ9NX07 287 aaKnown RBP5.13□□□□□ -1.59
CSDE1-212ENST00000529046 PDP2Q9P2J9 529 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-212ENST00000529046 CD207Q9UJ71 328 aa5.13□□□□□ -1.59
CSDE1-212ENST00000529046 EIF3FO00303 357 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-212ENST00000529046 HMMRO75330 724 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 IDH1O75874 414 aaKnown RBP5.12□□□□□ -1.59
CSDE1-212ENST00000529046 KRT38O76015 456 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 GH2P01242 217 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 CTSAP10619 480 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 ARSAP15289 507 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 ST6GAL1P15907 406 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 HOXB9P17482 250 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-212ENST00000529046 RHAGQ02094 409 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 RNASELQ05823 741 aaKnown RBP5.12□□□□□ -1.59
CSDE1-212ENST00000529046 PDCLQ13371 301 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 GRB14Q14449 540 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 COG2Q14746 738 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms