RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CLEC14AQ86T13 490 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 SETD3Q86TU7 594 aaPredicted RBP8.63□□□□□ -1.03
SSBP3-212ENST00000528930 ATCAYQ86WG3 371 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 NTAN1Q96AB6 310 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 PDLIM2Q96JY6 352 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 SLC46A1Q96NT5 459 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 MCEEQ96PE7 176 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 ISCUQ9H1K1 167 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 PCED1AQ9H1Q7 454 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 GPAMQ9HCL2 828 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 NDFIP2Q9NV92 336 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 OR12D3Q9UGF7 316 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 CAPN11Q9UMQ6 739 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 NEU3Q9UQ49 428 aa8.63□□□□□ -1.03
SSBP3-212ENST00000528930 NYNRINQ9P2P1 1898 aaKnown RBP8.62□□□□□ -1.03
SSBP3-212ENST00000528930 ILVBLA1L0T0 632 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 TMEM191CA6NGB0 347 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 C10orf142B7Z368 130 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 ATP9BO43861 1147 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 SNAP91O60641 907 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 RTN2O75298 545 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 ZMPSTE24O75844 475 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 LRIG2O94898 1065 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 MT-CO1P00395 513 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 FTLP02792 175 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-212ENST00000528930 DNTTP04053 509 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 GYPCP04921 128 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 RHOCP08134 193 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 SRCP12931 536 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 OR1E1P30953 314 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 DUSP3P51452 185 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-212ENST00000528930 ZBED6P86452 979 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 E2F1Q01094 437 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 ZNF776Q68DI1 518 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-212ENST00000528930 PPP1R2P3Q6NXS1 205 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 LAYNQ6UX15 382 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 TFAP2DQ7Z6R9 452 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 FAM124AQ86V42 546 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 NLRP14Q86W24 1093 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 MMAAQ8IVH4 418 aaKnown RBP8.62□□□□□ -1.03
SSBP3-212ENST00000528930 STK40Q8N2I9 435 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 SH2D3CQ8N5H7 860 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 EID2Q8N6I1 236 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 ARFGAP1Q8N6T3 406 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 OR7D4Q8NG98 312 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 CPLX3Q8WVH0 158 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 SYN2Q92777 582 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-212ENST00000528930 PRR11Q96HE9 360 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-212ENST00000528930 CNPY3Q9BT09 278 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 ZYG11BQ9C0D3 744 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 XPO4Q9C0E2 1151 aaKnown RBP8.62□□□□□ -1.03
SSBP3-212ENST00000528930 PABPC3Q9H361 631 aaKnown RBP8.62□□□□□ -1.03
SSBP3-212ENST00000528930 TM9SF3Q9HD45 589 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 SERGEFQ9UGK8 458 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 VPS28Q9UK41 221 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 HS3ST2Q9Y278 367 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 CHD5Q8TDI0 1954 aa8.62□□□□□ -1.03
SSBP3-212ENST00000528930 K7ERQ8 282 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 MID1O15344 667 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 SMAD6O43541 496 aaKnown RBP8.61□□□□□ -1.03
SSBP3-212ENST00000528930 SEMA7AO75326 666 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 ZNF821O75541 412 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-212ENST00000528930 DDAH2O95865 285 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 CD160O95971 181 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 PLEKP08567 350 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-212ENST00000528930 SLC8A1P32418 973 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 NNMTP40261 264 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 UQCRFS1P47985 274 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 KRT83P78385 493 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 DLG2Q15700 870 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 CST6Q15828 149 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 CAPRIN2Q6IMN6 1127 aaKnown RBP8.61□□□□□ -1.03
SSBP3-212ENST00000528930 DCUN1D2Q6PH85 259 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 ZNF783Q6ZMS7 281 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 USP30Q70CQ3 517 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 SLFN11Q7Z7L1 901 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 PYROXD2Q8N2H3 581 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 DCAF4L2Q8NA75 395 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 FAM131CQ96AQ9 280 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 IQCDQ96DY2 449 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 DEPDC7Q96QD5 511 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 ELF4Q99607 663 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-212ENST00000528930 ACE2Q9BYF1 805 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-212ENST00000528930 TRIM7Q9C029 511 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 BTBD1Q9H0C5 482 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 MUC3BQ9H195 1237 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 TSPY26PQ9H489 355 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 SUV39H2Q9H5I1 410 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 C6orf106Q9H6K1 298 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-212ENST00000528930 RETREG1Q9H6L5 497 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 SGK2Q9HBY8 427 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 RAB6BQ9NRW1 208 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 PARVAQ9NVD7 372 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 TMEM248Q9NWD8 314 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 DONSONQ9NYP3 566 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 CNOT8Q9UFF9 292 aaKnown RBP8.61□□□□□ -1.03
SSBP3-212ENST00000528930 VPS51Q9UID3 782 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 SLC25A13Q9UJS0 675 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 TUBD1Q9UJT1 453 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 SARDHQ9UL12 918 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms