RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 PCDH12Q9NPG4 1184 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 APOBEC3BQ9UH17 382 aaKnown RBP9.16□□□□□ -0.94
CMTM1-210ENST00000528441 ATP8A1Q9Y2Q0 1164 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 HS3ST3A1Q9Y663 406 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 PCNX2A6NKB5 2137 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 TTC24A2A3L6 582 aaPredicted RBP9.15□□□□□ -0.94
CMTM1-210ENST00000528441 FAM149AA5PLN7 773 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 POM121BA6NF01 834 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 GOLGA6L6A8MZA4 724 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 CACNB4O00305 520 aaPredicted RBP9.15□□□□□ -0.94
CMTM1-210ENST00000528441 RAD51BO15315 384 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 MFSD11O43934 449 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 PTMAP06454 111 aaKnown RBP9.15□□□□□ -0.94
CMTM1-210ENST00000528441 CYP2A6P11509 494 aaPredicted RBP9.15□□□□□ -0.94
CMTM1-210ENST00000528441 C6P13671 934 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 TIMP2P16035 220 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 JUNDP17535 347 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 MX2P20592 715 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 CA4P22748 312 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 TNNT3P45378 269 aaPredicted RBP9.15□□□□□ -0.94
CMTM1-210ENST00000528441 RGRP47804 291 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 HCAR3P49019 387 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 LIG3P49916 1009 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 SUOXP51687 545 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 DYNLT1P63172 113 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 SLC25A11Q02978 314 aaKnown RBP9.15□□□□□ -0.94
CMTM1-210ENST00000528441 SLC10A7Q0GE19 358 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 BIRC2Q13490 618 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 LRRC14Q15048 493 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 PDK2Q15119 407 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 IRF4Q15306 451 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 UGP2Q16851 508 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 TMEM259Q4ZIN3 620 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 CCDC181Q5TID7 509 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 ENPP7Q6UWV6 458 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 SLCO6A1Q86UG4 719 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 CCDC50Q8IVM0 306 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 ARHGAP12Q8IWW6 846 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 TP53INP2Q8IXH6 220 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 TMEM145Q8NBT3 493 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 SLC35G2Q8TBE7 412 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 BTN2A2Q8WVV5 523 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 GLMNQ92990 594 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 ZNF599Q96NL3 588 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 DNAJC7Q99615 494 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 DUSP23Q9BVJ7 150 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 ABCG4Q9H172 646 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 ETNK2Q9NVF9 386 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 SEPT10Q9P0V9 454 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 RCOR3Q9P2K3 495 aaPredicted RBP9.15□□□□□ -0.94
CMTM1-210ENST00000528441 SPASTQ9UBP0 616 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 DKK3Q9UBP4 350 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 MSRB2Q9Y3D2 182 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 HEY1Q9Y5J3 304 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 NCOR2Q9Y618 2525 aa9.15□□□□□ -0.94
CMTM1-210ENST00000528441 KNL1Q8NG31 2342 aa9.15□□□□□ -0.95
CMTM1-210ENST00000528441 A0A1W2PQ67 120 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 APOL1O14791 398 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 SCAMP1O15126 338 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 SIGLEC6O43699 453 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 CBFA2T3O75081 653 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 PIAS2O75928 621 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 PROS1P07225 676 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 ANXA6P08133 673 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 CD48P09326 243 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 CKMT2P17540 419 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 DGKAP23743 735 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 IGFALSP35858 605 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 MAGEA1P43355 309 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 RXRGP48443 463 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 BLKP51451 505 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 DUSP3P51452 185 aaPredicted RBP9.14□□□□□ -0.95
CMTM1-210ENST00000528441 PPARDQ03181 441 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 AP1B1Q10567 949 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 C1orf61Q13536 156 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 DPYSL3Q14195 570 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 FGL2Q14314 439 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 ATP13A4Q4VNC1 1196 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 ANKRD20A8PQ5CZ79 823 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 ARTNQ5T4W7 220 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 ARMC12Q5T9G4 340 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 KAZNQ674X7 775 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 CYP4V2Q6ZWL3 525 aaPredicted RBP9.14□□□□□ -0.95
CMTM1-210ENST00000528441 USP45Q70EL2 814 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 RAB44Q7Z6P3 723 aaPredicted RBP9.14□□□□□ -0.95
CMTM1-210ENST00000528441 ABI3BPQ7Z7G0 1075 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 GLRX5Q86SX6 157 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 HID1Q8IV36 788 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 SCG3Q8WXD2 468 aaKnown RBP9.14□□□□□ -0.95
CMTM1-210ENST00000528441 RFFLQ8WZ73 363 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 ZNF670Q9BS34 389 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 POLR1EQ9GZS1 481 aaKnown RBP9.14□□□□□ -0.95
CMTM1-210ENST00000528441 ZMYND15Q9H091 742 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 CCDC86Q9H6F5 360 aaKnown RBP9.14□□□□□ -0.95
CMTM1-210ENST00000528441 RBM22Q9NW64 420 aaKnown RBP eCLIP9.14□□□□□ -0.95
CMTM1-210ENST00000528441 KLQ9UEF7 1012 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 PCDHGC4Q9Y5F7 938 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 AK5Q9Y6K8 562 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 CABIN1Q9Y6J0 2220 aa9.14□□□□□ -0.95
CMTM1-210ENST00000528441 CACNA1AO00555 2505 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms