RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 SH2D4BQ5SQS7 431 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 KIAA1614Q5VZ46 1190 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 DENND5AQ6IQ26 1287 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 CXorf57Q6NSI4 855 aaKnown RBP7.78□□□□□ -1.16
SOX6-211ENST00000528429 CHST9Q7L1S5 443 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 TMEM135Q86UB9 458 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 MFN1Q8IWA4 741 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 BBS5Q8N3I7 341 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 ESX1Q8N693 406 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 TDRD5Q8NAT2 981 aaKnown RBP7.78□□□□□ -1.16
SOX6-211ENST00000528429 HJURPQ8NCD3 748 aaPredicted RBP7.78□□□□□ -1.16
SOX6-211ENST00000528429 PPHLN1Q8NEY8 458 aaKnown RBP7.78□□□□□ -1.16
SOX6-211ENST00000528429 SHKBP1Q8TBC3 707 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 WFDC5Q8TCV5 224 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 SH3RF2Q8TEC5 729 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 MZB1Q8WU39 189 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 ING5Q8WYH8 240 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 AZIN2Q96A70 460 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 PPP1R14BQ96C90 147 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 IFT43Q96FT9 208 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 CHMP6Q96FZ7 201 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 PPP1R2P1Q96PQ5 205 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 CINPQ9BW66 212 aaPredicted RBP7.78□□□□□ -1.16
SOX6-211ENST00000528429 VCX3BQ9H321 246 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 PLXNA4Q9HCM2 1894 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 PCMTD2Q9NV79 361 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 RIMKLBQ9ULI2 386 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 SOX13Q9UN79 622 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 SMG5Q9UPR3 1016 aaKnown RBP7.78□□□□□ -1.16
SOX6-211ENST00000528429 CCL26Q9Y258 94 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 RWDD3Q9Y3V2 267 aa7.78□□□□□ -1.16
SOX6-211ENST00000528429 ZCWPW2A0A1B0GU75 182 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 FAM237BA0A1B0GVD1 139 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 TCP11X1B4DZS4 312 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 AP3B1O00203 1094 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 CHUKO15111 745 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 USP1O94782 785 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 ALDH1A2O94788 518 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 FAM107AO95990 144 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 PRKCGP05129 697 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 RHOP08100 348 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 MMP2P08253 660 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 PIRTP0C851 137 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 ADRA1AP35348 466 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 PDE1BQ01064 536 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 IL9RQ01113 521 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 GPM6BQ13491 265 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 QPCTQ16769 361 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 PCID2Q5JVF3 399 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 LVRNQ6Q4G3 990 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 KDELC1Q6UW63 502 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 RANBP10Q6VN20 620 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 GRASPQ7Z6J2 395 aaPredicted RBP7.77□□□□□ -1.16
SOX6-211ENST00000528429 SETD3Q86TU7 594 aaPredicted RBP7.77□□□□□ -1.16
SOX6-211ENST00000528429 KCNMB4Q86W47 210 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 LRRC34Q8IZ02 419 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 ARRDC2Q8TBH0 407 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 TCP10LQ8TDR4 215 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 ZNF473Q8WTR7 871 aaKnown RBP7.77□□□□□ -1.16
SOX6-211ENST00000528429 PDFQ9HBH1 243 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 IARS2Q9NSE4 1012 aaKnown RBP7.77□□□□□ -1.16
SOX6-211ENST00000528429 SLC17A7Q9P2U7 560 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 DNMT3BQ9UBC3 853 aaKnown RBP7.77□□□□□ -1.16
SOX6-211ENST00000528429 SLC2A6Q9UGQ3 507 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 SEPT3Q9UH03 358 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 ZNF180Q9UJW8 692 aa7.77□□□□□ -1.16
SOX6-211ENST00000528429 MAGEB16A2A368 324 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 C2orf81A6NN90 581 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 LEFTY2O00292 366 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 COPEO14579 308 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 PRPF4O43172 522 aaKnown RBP eCLIP7.77□□□□□ -1.17
SOX6-211ENST00000528429 BUD23O43709 281 aaKnown RBP7.77□□□□□ -1.17
SOX6-211ENST00000528429 TYROBPO43914 113 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 GREM1O60565 184 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 LUC7L3O95232 432 aaKnown RBP7.77□□□□□ -1.17
SOX6-211ENST00000528429 VAPBO95292 243 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 SLC4A1P02730 911 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 SERPINF2P08697 491 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 SAT1P21673 171 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 ADRA1DP25100 572 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 PBX2P40425 430 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 CSKP41240 450 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 RGRP47804 291 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 GALNT3Q14435 633 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 CBX2Q14781 532 aaPredicted RBP7.77□□□□□ -1.17
SOX6-211ENST00000528429 ESRP1Q6NXG1 681 aaKnown RBP7.77□□□□□ -1.17
SOX6-211ENST00000528429 C16orf54Q6UWD8 224 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 Q6ZNB5 142 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 NCCRP1Q6ZVX7 275 aaPredicted RBP7.77□□□□□ -1.17
SOX6-211ENST00000528429 MARK2Q7KZI7 788 aaKnown RBP7.77□□□□□ -1.17
SOX6-211ENST00000528429 STRA8Q7Z7C7 330 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 C11orf74Q86VG3 221 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 GRAMD2AQ8IUY3 354 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 CCDC117Q8IWD4 279 aaPredicted RBP7.77□□□□□ -1.17
SOX6-211ENST00000528429 TEX26Q8N6G2 289 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 PDCD6IPQ8WUM4 868 aaKnown RBP7.77□□□□□ -1.17
SOX6-211ENST00000528429 ATP2A3Q93084 1043 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 TGS1Q96RS0 853 aaKnown RBP7.77□□□□□ -1.17
SOX6-211ENST00000528429 VPS45Q9NRW7 570 aa7.77□□□□□ -1.17
SOX6-211ENST00000528429 TBC1D30Q9Y2I9 924 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms