RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 TP53I13Q8NBR0 393 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 RAPGEF5Q92565 580 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 MAML1Q92585 1016 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 HAUS2Q9NVX0 235 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 TOR4AQ9NXH8 423 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 DDX56Q9NY93 547 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 FTSJ1Q9UET6 329 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 MSRB2Q9Y3D2 182 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 PCDHGA1Q9Y5H4 931 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 A0A0A6YYK5 440 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 LRRD1A4D1F6 860 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 NEMP2A6NFY4 417 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 C3orf70A6NLC5 250 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 HYAL3O43820 417 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 PIAS2O75928 621 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 TOP3BO95985 862 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 C1SP09871 688 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 ZFXP17010 805 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 FECHP22830 423 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 DGKAP23743 735 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 PEX5P50542 639 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 HNRNPKP61978 463 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 FZD2Q14332 565 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 LRRC14Q15048 493 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 DPPA4Q7L190 304 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 PARGQ86W56 976 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 SLC25A45Q8N413 288 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 CHCHD4Q8N4Q1 142 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 EID2Q8N6I1 236 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 PAF1Q8N7H5 531 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 HDAC11Q96DB2 347 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 CNDP2Q96KP4 475 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 CALR3Q96L12 384 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 NSMCE3Q96MG7 304 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 CNTNAP3BQ96NU0 1288 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 WRAP53Q9BUR4 548 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 MAK16Q9BXY0 300 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 CNTNAP3Q9BZ76 1288 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 NOD2Q9HC29 1040 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 PHTF1Q9UMS5 762 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 PCDHA13Q9Y5I0 950 aa12.19□□□□□ -0.46
TRAPPC4-209ENST00000528230 PLXNB3Q9ULL4 1909 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 H3BM21 787 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 ENC1O14682 589 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 LZTS3O60299 673 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 CSF2P04141 144 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 C6P13671 934 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 CCNB1P14635 433 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 NME1P15531 152 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 COMTP21964 271 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 IGFALSP35858 605 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 NOP2P46087 812 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 LIG3P49916 1009 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 THOP1P52888 689 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 SLC10A2Q12908 348 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 RALGDSQ12967 914 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 ZNF211Q13398 564 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 PDE1CQ14123 709 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 WSCD2Q2TBF2 565 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 ODF2Q5BJF6 829 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 SLC9A4Q6AI14 798 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 ALG1LQ6GMV1 187 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 LIPIQ6XZB0 460 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 PNPLA1Q8N8W4 532 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 BTN2A2Q8WVV5 523 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 ZNF830Q96NB3 372 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 POLR1EQ9GZS1 481 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 NT5MQ9NPB1 228 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 MBNL1Q9NR56 388 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 RBM22Q9NW64 420 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 DNAJC28Q9NX36 388 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 KCTD5Q9NXV2 234 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 DTLQ9NZJ0 730 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 PPIL1Q9Y3C6 166 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 PCDHGC4Q9Y5F7 938 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 ALG6Q9Y672 507 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 EPN1Q9Y6I3 576 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 CSNK1G3Q9Y6M4 447 aa12.18□□□□□ -0.46
TRAPPC4-209ENST00000528230 TTC24A2A3L6 582 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 PSTPIP1O43586 416 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 SPOPO43791 374 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 SDC3O75056 442 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 NDUFA10O95299 355 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 CKMT2P17540 419 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 SPINK2P20155 84 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 MAXP61244 160 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 GBE1Q04446 702 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 PPIDQ08752 370 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 ILKQ13418 452 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 MTM1Q13496 603 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 IRF4Q15306 451 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 TAZQ16635 292 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 HS1BP3Q53T59 392 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 TMPRSS7Q7RTY8 843 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 CCDC13Q8IYE1 715 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 NDUFAF2Q8N183 169 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 PLD5Q8N7P1 536 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 OR4C6Q8NH72 309 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms