RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 NEBLO76041 1014 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 PEX11BO96011 259 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 PCCBP05166 539 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 ALPPL2P10696 532 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 JUNDP17535 347 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 MMP12P39900 470 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 ARSEP51690 589 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 PFN3P60673 137 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 POLR2LP62875 67 aaKnown RBP15.64■□□□□ 0.09
CAPN1-213ENST00000527897 TBX2Q13207 712 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-213ENST00000527897 PTK2BQ14289 1009 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 LRRC14Q15048 493 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 PDK2Q15119 407 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 NCBP2-AS2Q69YL0 99 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 SARM1Q6SZW1 724 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 PGBD5Q8N414 524 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 TP53I13Q8NBR0 393 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-213ENST00000527897 LMX1AQ8TE12 382 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 LRRN4Q8WUT4 740 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 ZCCHC14Q8WYQ9 949 aaKnown RBP15.64■□□□□ 0.09
CAPN1-213ENST00000527897 NSMCE3Q96MG7 304 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 ZNF670Q9BS34 389 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 TMEM121BQ9BXQ6 578 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-213ENST00000527897 NOD2Q9HC29 1040 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 LRRD1A4D1F6 860 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 CSF2P04141 144 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 ELFN1P0C7U0 828 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 MYF5P13349 255 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 CKMT2P17540 419 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 MAN1A1P33908 653 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 HSPA9P38646 679 aaKnown RBP15.63■□□□□ 0.09
CAPN1-213ENST00000527897 ACADVLP49748 655 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 TCEA2Q15560 299 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 WSCD2Q2TBF2 565 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 ODF2Q5BJF6 829 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 FAXCQ5TGI0 409 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 DENND2CQ68D51 928 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 CCNI2Q6ZMN8 369 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-213ENST00000527897 TMPRSS7Q7RTY8 843 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 RHOT2Q8IXI1 618 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 GALNT15Q8N3T1 639 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 ZNF548Q8NEK5 533 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-213ENST00000527897 OR4C6Q8NH72 309 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 FAM71BQ8TC56 605 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 RAPGEF5Q92565 580 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 IFT43Q96FT9 208 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 NUDCD1Q96RS6 583 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 ANP32EQ9BTT0 268 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 GPR27Q9NS67 375 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 KLF15Q9UIH9 416 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 ZMIZ1Q9ULJ6 1067 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 HYOU1Q9Y4L1 999 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 IGF2RP11717 2491 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 CACNA1BQ00975 2339 aa15.63■□□□□ 0.09
CAPN1-213ENST00000527897 FREM2Q5SZK8 3169 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 USP24Q9UPU5 2620 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 NEMP2A6NFY4 417 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 TRAFD1O14545 582 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-213ENST00000527897 DKK1O94907 266 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 CPP00450 1065 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 NME1P15531 152 aaKnown RBP15.62■□□□□ 0.09
CAPN1-213ENST00000527897 GARSP41250 739 aaKnown RBP15.62■□□□□ 0.09
CAPN1-213ENST00000527897 NOP2P46087 812 aaKnown RBP15.62■□□□□ 0.09
CAPN1-213ENST00000527897 GBE1Q04446 702 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 GALNT2Q10471 571 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 EIF2B5Q13144 721 aaKnown RBP15.62■□□□□ 0.09
CAPN1-213ENST00000527897 ZNF211Q13398 564 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-213ENST00000527897 INPP5AQ14642 412 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 ACOX1Q15067 660 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 PAFAH1B3Q15102 231 aaKnown RBP15.62■□□□□ 0.09
CAPN1-213ENST00000527897 PROX2Q3B8N5 592 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 RBFAQ8N0V3 343 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 CCNYQ8ND76 341 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 RFFLQ8WZ73 363 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 ECHDC3Q96DC8 303 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 MGME1Q9BQP7 344 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 RBSNQ9H1K0 784 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 TCEAL2Q9H3H9 227 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-213ENST00000527897 APOBEC3BQ9UH17 382 aaKnown RBP15.62■□□□□ 0.09
CAPN1-213ENST00000527897 OR1A2Q9Y585 309 aa15.62■□□□□ 0.09
CAPN1-213ENST00000527897 FAM221BA6H8Z2 402 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 SCAMP1O15126 338 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 AQP9O43315 295 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 SOCS5O75159 536 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 KRT37O76014 449 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 RECQL5O94762 991 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-213ENST00000527897 KRT1P04264 644 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 JUPP14923 745 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 KDELR1P24390 212 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 ARHGAP25P42331 645 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 MAGEA1P43355 309 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 YPEL5P62699 121 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 TRAF2Q12933 501 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 RALGDSQ12967 914 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 C1orf61Q13536 156 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 IFI16Q16666 785 aaKnown RBP15.61■□□□□ 0.09
CAPN1-213ENST00000527897 DEFB133Q30KQ1 61 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 PRRT3Q5FWE3 981 aa15.61■□□□□ 0.09
CAPN1-213ENST00000527897 TIGD7Q6NT04 549 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-213ENST00000527897 LIPIQ6XZB0 460 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms