RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CR2P20023 1033 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 COMTP21964 271 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 HSPA9P38646 679 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 MMP12P39900 470 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 GARSP41250 739 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 SUOXP51687 545 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 PFN3P60673 137 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 RALGDSQ12967 914 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 PTPRRQ15256 657 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 IRF4Q15306 451 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 WSCD2Q2TBF2 565 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 DCP2Q8IU60 420 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 DENND6BQ8NEG7 585 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 FAM174AQ8TBP5 190 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 FAF2Q96CS3 445 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 ECHDC3Q96DC8 303 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 MRFAP1L1Q96HT8 127 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 RNF157Q96PX1 679 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 MGME1Q9BQP7 344 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 C1QTNF7Q9BXJ2 289 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 GOLPH3Q9H4A6 298 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 GPR27Q9NS67 375 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 KLF15Q9UIH9 416 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 NEUROG3Q9Y4Z2 214 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 PCDHA13Q9Y5I0 950 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 C3orf70A6NLC5 250 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 MATN3O15232 486 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 SIGLEC6O43699 453 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 NEBLO76041 1014 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 MYF5P13349 255 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 THOP1P52888 689 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 CLDN6P56747 220 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 POLR2LP62875 67 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 TRAF2Q12933 501 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 EIF2B5Q13144 721 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 LRRC14Q15048 493 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 SPA17Q15506 151 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 IFI16Q16666 785 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 DHRS13Q6UX07 377 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 NPNTQ6UXI9 565 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 UNQ6494/PRO21346Q6UXR6 183 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 LIPIQ6XZB0 460 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 PARGQ86W56 976 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 LRRC49Q8IUZ0 686 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 TEX26Q8N6G2 289 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 CCNYQ8ND76 341 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 SEMA3CQ99985 751 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 TCEAL2Q9H3H9 227 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 RBM22Q9NW64 420 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 DTLQ9NZJ0 730 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 MSRB2Q9Y3D2 182 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 TTLL3Q9Y4R7 772 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 HEY1Q9Y5J3 304 aa12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 COL5A1P20908 1838 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-205ENST00000525079 FAM149AA5PLN7 773 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 SOWAHDA6NJG2 315 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 HTRA2O43464 458 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 SPOPO43791 374 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 DKK1O94907 266 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 CPP00450 1065 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 CSF2P04141 144 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 PCCBP05166 539 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 GIMD1P0DJR0 217 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 JUNDP17535 347 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 CCNCP24863 283 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 SLC1A1P43005 524 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 HNRNPKP61978 463 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 DYNLT1P63172 113 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 DSC2Q02487 901 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 IHHQ14623 411 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 INPP5AQ14642 412 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 TCEAL1Q15170 157 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 LLGL1Q15334 1064 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 ODF2Q5BJF6 829 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 DENND2CQ68D51 928 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 NYAP1Q6ZVC0 841 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 B4GALNT4Q76KP1 1039 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 DPPA4Q7L190 304 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 RFX6Q8HWS3 928 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 RHOT1Q8IXI2 618 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 RBFAQ8N0V3 343 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 PLA2G15Q8NCC3 412 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 MAML1Q92585 1016 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 GATA6Q92908 595 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 IFT43Q96FT9 208 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 TSGA13Q96PP4 275 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 SMIM14Q96QK8 99 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 LGMNQ99538 433 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 TMEM121BQ9BXQ6 578 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 MAK16Q9BXY0 300 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 B4GALT6Q9UBX8 382 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 PNMA8BQ9ULN7 279 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 OR1A2Q9Y585 309 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 ALG6Q9Y672 507 aa12.91□□□□□ -0.34
TRAPPC4-205ENST00000525079 PTPRBP23467 1997 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 A0A0U1RQS6 177 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 APOL1O14791 398 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 SCAMP1O15126 338 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms