RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 CPA5Q8WXQ8 436 aa13.96□□□□□ -0.17
CSTF3-206ENST00000524827 TMEM159Q96B96 161 aa13.96□□□□□ -0.17
CSTF3-206ENST00000524827 TBC1D31Q96DN5 1066 aa13.96□□□□□ -0.17
CSTF3-206ENST00000524827 RBM15Q96T37 977 aaKnown RBP eCLIP13.96□□□□□ -0.17
CSTF3-206ENST00000524827 SEMA3CQ99985 751 aa13.96□□□□□ -0.17
CSTF3-206ENST00000524827 APPL1Q9UKG1 709 aa13.96□□□□□ -0.17
CSTF3-206ENST00000524827 MFHAS1Q9Y4C4 1052 aa13.96□□□□□ -0.17
CSTF3-206ENST00000524827 OR1A2Q9Y585 309 aa13.96□□□□□ -0.17
CSTF3-206ENST00000524827 FHOD1Q9Y613 1164 aa13.96□□□□□ -0.17
CSTF3-206ENST00000524827 NBASA2RRP1 2371 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 PIGNO95427 931 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 PCCBP05166 539 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 PLEKP08567 350 aaPredicted RBP13.95□□□□□ -0.18
CSTF3-206ENST00000524827 GLB1P16278 677 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 SUOXP51687 545 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 MAPK10P53779 464 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 CYP4F2P78329 520 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 MAN2A1Q16706 1144 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 TMPRSS9Q7Z410 1059 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 SPRED1Q7Z699 444 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 DTX1Q86Y01 620 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 ZNF354CQ86Y25 554 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 SLITRK4Q8IW52 837 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 SFTPA2Q8IWL1 248 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 CCDC185Q8N715 623 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 ZSCAN1Q8NBB4 408 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 ATL2Q8NHH9 583 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 HTR3CQ8WXA8 447 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 RXFP2Q8WXD0 754 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 CASKIN2Q8WXE0 1202 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 USP7Q93009 1102 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 EXOC2Q96KP1 924 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 WDR92Q96MX6 357 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 KLC2Q9H0B6 622 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 NOL6Q9H6R4 1146 aaKnown RBP13.95□□□□□ -0.18
CSTF3-206ENST00000524827 PCDH12Q9NPG4 1184 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 LHX3Q9UBR4 397 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 DGKBQ9Y6T7 804 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 RNF215Q9Y6U7 377 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 ANKRD36A6QL64 1941 aa13.95□□□□□ -0.18
CSTF3-206ENST00000524827 A0A1W2PQC6 194 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 TSPAN11A1L157 253 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 C9orf172C9J069 976 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 PPFIA2O75334 1257 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 TNFP01375 233 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 MMEP08473 750 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 SDC4P31431 198 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 MTM1Q13496 603 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 CLCA4Q14CN2 919 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 CCDC14Q49A88 953 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 INO80DQ53TQ3 878 aaPredicted RBP13.94□□□□□ -0.18
CSTF3-206ENST00000524827 PHF19Q5T6S3 580 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 OGFOD3Q6PK18 319 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 ZNF574Q6ZN55 896 aaPredicted RBP13.94□□□□□ -0.18
CSTF3-206ENST00000524827 EPS8L1Q8TE68 723 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 OR1E3Q8WZA6 343 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 HMCESQ96FZ2 354 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 CMKLR1Q99788 373 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 NCAPGQ9BPX3 1015 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 FUCA2Q9BTY2 467 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 PCDHB11Q9Y5F2 797 aa13.94□□□□□ -0.18
CSTF3-206ENST00000524827 ARHGEF17Q96PE2 2063 aaPredicted RBP13.94□□□□□ -0.18
CSTF3-206ENST00000524827 SDK2Q58EX2 2172 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 C2CD4BA6NLJ0 364 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 B4DGG1 531 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 GADD45BO75293 160 aaPredicted RBP13.93□□□□□ -0.18
CSTF3-206ENST00000524827 PNLIPP16233 465 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 CD82P27701 267 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 MMP12P39900 470 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 LIG3P49916 1009 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 HDAC4P56524 1084 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 HLTFQ14527 1009 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSTF3-206ENST00000524827 C16orf72Q14CZ0 275 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 AGERQ15109 404 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 UGP2Q16851 508 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 C14orf28Q4W4Y0 310 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 ERAP2Q6P179 960 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 STRADAQ7RTN6 431 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 TAF8Q7Z7C8 310 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 PHLDB2Q86SQ0 1253 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 RTL3Q8N8U3 475 aaKnown RBP13.93□□□□□ -0.18
CSTF3-206ENST00000524827 PLA2G15Q8NCC3 412 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 FAM46DQ8NEK8 389 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 JOSD2Q8TAC2 188 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 GPT2Q8TD30 523 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 HCAR2Q8TDS4 363 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 NAA15Q9BXJ9 866 aaKnown RBP13.93□□□□□ -0.18
CSTF3-206ENST00000524827 SLC25A18Q9H1K4 315 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 NDST4Q9H3R1 872 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 SEMA6CQ9H3T2 930 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 FGF22Q9HCT0 170 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 GEMIN8Q9NWZ8 242 aaKnown RBP13.93□□□□□ -0.18
CSTF3-206ENST00000524827 LRIT1Q9P2V4 623 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 DAAM1Q9Y4D1 1078 aa13.93□□□□□ -0.18
CSTF3-206ENST00000524827 TMEM202A6NGA9 273 aa13.92□□□□□ -0.18
CSTF3-206ENST00000524827 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.92□□□□□ -0.18
CSTF3-206ENST00000524827 PRKCGP05129 697 aa13.92□□□□□ -0.18
CSTF3-206ENST00000524827 MMP8P22894 467 aa13.92□□□□□ -0.18
CSTF3-206ENST00000524827 PTPN9P43378 593 aa13.92□□□□□ -0.18
CSTF3-206ENST00000524827 KIAA1024LP59773 190 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms