RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 BCAP31P51572 246 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 PITX1P78337 314 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-225ENST00000524141 GRSF1Q12849 480 aaKnown RBP eCLIP10.32□□□□□ -0.76
SPIDR-225ENST00000524141 PMS2P3Q13401 168 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 PPP1R3AQ16821 1122 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 TECRLQ5HYJ1 363 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 AARS2Q5JTZ9 985 aaKnown RBP10.32□□□□□ -0.76
SPIDR-225ENST00000524141 NIPAL1Q6NVV3 410 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 DCLRE1AQ6PJP8 1040 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 KLHDC8BQ8IXV7 354 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 PDPRQ8NCN5 879 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 CYGBQ8WWM9 190 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 SNX27Q96L92 541 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 SLC2A13Q96QE2 648 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 GPATCH1Q9BRR8 931 aaKnown RBP10.32□□□□□ -0.76
SPIDR-225ENST00000524141 C1orf50Q9BV19 199 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 TBC1D13Q9NVG8 400 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 TSC2P49815 1807 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 IQCA1LA6NCM1 817 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 SEC24DO94855 1032 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-225ENST00000524141 RBP1P09455 135 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 INSRRP14616 1297 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 RPL10P27635 214 aaKnown RBP10.32□□□□□ -0.76
SPIDR-225ENST00000524141 CAPGP40121 348 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 PGGT1BP53609 377 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 TAS2R39P59534 338 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 ZNF33AQ06730 810 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 CTBP1Q13363 440 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 ARL13BQ3SXY8 428 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 FGD3Q5JSP0 725 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 SPRED1Q7Z699 444 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 DENND6AQ8IWF6 608 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 DHRSXQ8N5I4 330 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 MINDY1Q8N5J2 469 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 LINC01465Q8N7H1 131 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 GABPB2Q8TAK5 448 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-225ENST00000524141 TRUB1Q8WWH5 349 aaKnown RBP10.32□□□□□ -0.76
SPIDR-225ENST00000524141 MYRFLQ96LU7 910 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 PPP1R16BQ96T49 567 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 SPATC1LQ9H0A9 340 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 CDHR5Q9HBB8 845 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 GID8Q9NWU2 228 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 SMPD3Q9NY59 655 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-225ENST00000524141 SELENONQ9NZV5 590 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 B3GNT3Q9Y2A9 372 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 FADS3Q9Y5Q0 445 aa10.32□□□□□ -0.76
SPIDR-225ENST00000524141 A8MT66 165 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 FAM72CH0Y354 149 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 APBA3O96018 575 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 TFPTP0C1Z6 253 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 CPB1P15086 417 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 SLC1A2P43004 574 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 TMBIM6P55061 237 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 GSTM4Q03013 218 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 ZBTB6Q15916 424 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 FBXO47Q5MNV8 452 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 FAM72AQ5TYM5 149 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 C9orf57Q5W0N0 161 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 FAM72DQ6L9T8 149 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 KIAA0408Q6ZU52 694 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 LARP4Q71RC2 724 aaKnown RBP eCLIP10.31□□□□□ -0.762e-6■■■■■ 38.7
SPIDR-225ENST00000524141 FAM72BQ86X60 149 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 MFSD6LQ8IWD5 586 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 CENPSQ8N2Z9 138 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 SPATA6LQ8N4H0 392 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 NPWQ8N729 165 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 LEMD2Q8NC56 503 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 C2CD4AQ8NCU7 369 aaPredicted RBP10.31□□□□□ -0.76
SPIDR-225ENST00000524141 TSPAN17Q96FV3 270 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 ZNF560Q96MR9 790 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 PPP1R2P1Q96PQ5 205 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 TBL1YQ9BQ87 522 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 SLC39A3Q9BRY0 314 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 TMEM165Q9HC07 324 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 IGSF5Q9NSI5 407 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 UBP1Q9NZI7 540 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 SEPT3Q9UH03 358 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 OAZ3Q9UMX2 235 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 TRAF6Q9Y4K3 522 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 SBF1O95248 1867 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 NUP205Q92621 2012 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 CCDC78A2IDD5 438 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 NEMP2A6NFY4 417 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 NME4O00746 187 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 ANGPT2O15123 496 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 ANXA9O76027 345 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 CPNE6O95741 557 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 JCHAINP01591 159 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 VTNP04004 478 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 CCNA2P20248 432 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 MAP4P27816 1152 aaKnown RBP10.31□□□□□ -0.76
SPIDR-225ENST00000524141 ARCN1P48444 511 aaKnown RBP10.31□□□□□ -0.76
SPIDR-225ENST00000524141 HLCSP50747 726 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 FOXM1Q08050 763 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 CSHL1Q14406 222 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 RGS21Q2M5E4 152 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 KIF19Q2TAC6 998 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 ZNF470Q6ECI4 717 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 FAM117BQ6P1L5 589 aa10.31□□□□□ -0.76
SPIDR-225ENST00000524141 GADL1Q6ZQY3 521 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms