RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 BTNL10A8MVZ5 291 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 HTRA2O43464 458 aaPredicted RBP17.98■□□□□ 0.47
CLK4-211ENST00000522556 CST8O60676 142 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 SDC3O75056 442 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 CBFA2T3O75081 653 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 PDHA1P08559 390 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 ZNF883P0CG24 379 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 C6P13671 934 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 CCNB1P14635 433 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 GM2AP17900 193 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 CCNCP24863 283 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 NUDT1P36639 197 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 HSPA9P38646 679 aaKnown RBP17.98■□□□□ 0.47
CLK4-211ENST00000522556 NAP1L1P55209 391 aaKnown RBP17.98■□□□□ 0.47
CLK4-211ENST00000522556 BNIP3Q12983 259 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 HNRNPDQ14103 355 aaKnown RBP17.98■□□□□ 0.47
CLK4-211ENST00000522556 GRM3Q14832 879 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 CNTD1Q8N815 330 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 TP53I13Q8NBR0 393 aaPredicted RBP17.98■□□□□ 0.47
CLK4-211ENST00000522556 ARRDC2Q8TBH0 407 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 CXorf40AQ8TE69 158 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 NSMCE1Q8WV22 266 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 ALG3Q92685 438 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 KLHDC7BQ96G42 594 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 GDF3Q9NR23 364 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 GPR27Q9NS67 375 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 PACSIN2Q9UNF0 486 aaPredicted RBP17.98■□□□□ 0.47
CLK4-211ENST00000522556 CAPN6Q9Y6Q1 641 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 TM7SF2O76062 418 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 TOP3BO95985 862 aaKnown RBP17.97■□□□□ 0.47
CLK4-211ENST00000522556 JCHAINP01591 159 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 CTNNA1P35221 906 aaKnown RBP17.97■□□□□ 0.47
CLK4-211ENST00000522556 LIG3P49916 1009 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 ITKQ08881 620 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 SLC14A1Q13336 389 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 IRF4Q15306 451 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 SLC45A4Q5BKX6 768 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 ZNF542PQ5EBM4 170 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 ALG1LQ6GMV1 187 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 TIGD7Q6NT04 549 aaPredicted RBP17.97■□□□□ 0.47
CLK4-211ENST00000522556 KYAT3Q6YP21 454 aaKnown RBP17.97■□□□□ 0.47
CLK4-211ENST00000522556 Q6ZSR6 202 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 LRRC49Q8IUZ0 686 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 HCAR2Q8TDS4 363 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 CENPTQ96BT3 561 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 ANP32EQ9BTT0 268 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 HEMGNQ9BXL5 484 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 MAK16Q9BXY0 300 aaKnown RBP17.97■□□□□ 0.47
CLK4-211ENST00000522556 B4GALT6Q9UBX8 382 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 PCOLCE2Q9UKZ9 415 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 PNMA8BQ9ULN7 279 aaPredicted RBP17.97■□□□□ 0.47
CLK4-211ENST00000522556 PCDHB9Q9Y5E1 797 aa17.97■□□□□ 0.47
CLK4-211ENST00000522556 LRP4O75096 1905 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 A6NNZ2 444 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 PGLSO95336 258 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 FTCDO95954 541 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 CPP00450 1065 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 MMP2P08253 660 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 CEACAM1P13688 526 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 CTPS1P17812 591 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 MX2P20592 715 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 LHCGRP22888 699 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 EPHA8P29322 1005 aaPredicted RBP17.96■□□□□ 0.47
CLK4-211ENST00000522556 ELP6Q0PNE2 266 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 AP1B1Q10567 949 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 SGCGQ13326 291 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 TFDP3Q5H9I0 405 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 DBX2Q6ZNG2 339 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 DPPA4Q7L190 304 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 KANSL1Q7Z3B3 1105 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 NT5DC3Q86UY8 548 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 IQCHQ86VS3 1027 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 CCDC50Q8IVM0 306 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 PELI3Q8N2H9 469 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 BBS5Q8N3I7 341 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 PAF1Q8N7H5 531 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 BAHD1Q8TBE0 780 aaPredicted RBP17.96■□□□□ 0.47
CLK4-211ENST00000522556 SETD7Q8WTS6 366 aaKnown RBP17.96■□□□□ 0.47
CLK4-211ENST00000522556 FATE1Q969F0 183 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 IL12RB2Q99665 862 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 POLR1EQ9GZS1 481 aaKnown RBP17.96■□□□□ 0.47
CLK4-211ENST00000522556 BRD8Q9H0E9 1235 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 SEPT10Q9P0V9 454 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 RAI2Q9Y5P3 530 aa17.96■□□□□ 0.47
CLK4-211ENST00000522556 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.95■□□□□ 0.46
CLK4-211ENST00000522556 NPIPB15A6NHN6 443 aaPredicted RBP17.95■□□□□ 0.46
CLK4-211ENST00000522556 PCDHGA12O60330 932 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 SOCS5O75159 536 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 ZRANB2O95218 330 aaKnown RBP eCLIP17.95■□□□□ 0.46
CLK4-211ENST00000522556 ADRB1P08588 477 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 ALPIP09923 528 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 CTNNA2P26232 953 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 IFI35P80217 286 aaPredicted RBP17.95■□□□□ 0.46
CLK4-211ENST00000522556 FZD2Q14332 565 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 CNGA3Q16281 694 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 WSCD2Q2TBF2 565 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 ODF2Q5BJF6 829 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 LIPIQ6XZB0 460 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 TSPAN33Q86UF1 283 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 EXD1Q8NHP7 514 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms