RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PIGHQ14442 188 aaPredicted RBP20.85■□□□□ 0.93
SDCBP-209ENST00000522243 RFTN1Q14699 578 aaPredicted RBP20.85■□□□□ 0.93
SDCBP-209ENST00000522243 LBRQ14739 615 aaKnown RBP20.85■□□□□ 0.93
SDCBP-209ENST00000522243 TCEA2Q15560 299 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 MACC1Q6ZN28 852 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 NYAP1Q6ZVC0 841 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 LZTR1Q8N653 840 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 DCBLD1Q8N8Z6 715 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 IFI44Q8TCB0 444 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 LRRC61Q9BV99 259 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 NRSN2Q9GZP1 204 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 LUC7L2Q9Y383 392 aaKnown RBP20.85■□□□□ 0.93
SDCBP-209ENST00000522243 PCDHB1Q9Y5F3 818 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 A8MX80 341 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 GYPCP04921 128 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 PCCBP05166 539 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 CELA2BP08218 269 aaPredicted RBP20.84■□□□□ 0.93
SDCBP-209ENST00000522243 PPARDQ03181 441 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 RALGDSQ12967 914 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 RTP5Q14D33 572 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 CCDC122Q5T0U0 273 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 TMCO4Q5TGY1 634 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 GUSBP11Q6P575 273 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 CRTC1Q6UUV9 634 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 TMCO3Q6UWJ1 677 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 RD3Q7Z3Z2 195 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 HID1Q8IV36 788 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 CACTIN-AS1Q8N1I8 211 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 TSACCQ96A04 125 aaPredicted RBP20.84■□□□□ 0.93
SDCBP-209ENST00000522243 CSPG4P5Q96PW8 444 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 SLC13A1Q9BZW2 595 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 CLPBQ9H078 707 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 ABCG4Q9H172 646 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 PCDH18Q9HCL0 1135 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 EVA1BQ9NVM1 165 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 SEPT3Q9UH03 358 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 IP6K2Q9UHH9 426 aa20.84■□□□□ 0.93
SDCBP-209ENST00000522243 CFAP47Q6ZTR5 3102 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 TLX3O43711 291 aaPredicted RBP20.83■□□□□ 0.93
SDCBP-209ENST00000522243 CYP1A2P05177 515 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 HOXB3P14651 431 aaPredicted RBP20.83■□□□□ 0.93
SDCBP-209ENST00000522243 TSHRP16473 764 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 CASP14P31944 242 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 SSR1P43307 286 aaKnown RBP20.83■□□□□ 0.93
SDCBP-209ENST00000522243 RENBPP51606 427 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 NSUN2Q08J23 767 aaKnown RBP eCLIP20.83■□□□□ 0.93
SDCBP-209ENST00000522243 INPP5AQ14642 412 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 CDCP2Q5VXM1 449 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 ALKBH5Q6P6C2 394 aaKnown RBP20.83■□□□□ 0.93
SDCBP-209ENST00000522243 ENPP7Q6UWV6 458 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 EFL1Q7Z2Z2 1120 aaKnown RBP20.83■□□□□ 0.93
SDCBP-209ENST00000522243 MAPK15Q8TD08 544 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 ECHDC3Q96DC8 303 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 PSKH2Q96QS6 385 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 APOOQ9BUR5 198 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 USP29Q9HBJ7 922 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 SALL4Q9UJQ4 1053 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 OR1A2Q9Y585 309 aa20.83■□□□□ 0.93
SDCBP-209ENST00000522243 LRP4O75096 1905 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 TRAFD1O14545 582 aaPredicted RBP20.82■□□□□ 0.92
SDCBP-209ENST00000522243 TOR1BO14657 336 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 TPP1O14773 563 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 GP1BAP07359 652 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 ANXA6P08133 673 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 AP1S1P61966 158 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 SLC25A11Q02978 314 aaKnown RBP20.82■□□□□ 0.92
SDCBP-209ENST00000522243 MMRN1Q13201 1228 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 ZNF235Q14590 738 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 ALG11Q2TAA5 492 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 ZSCAN23Q3MJ62 389 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 LIPIQ6XZB0 460 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 PDZD3Q86UT5 571 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 PGBD5Q8N414 524 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 NIPA2Q8N8Q9 360 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 PLA2G15Q8NCC3 412 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 TEKT4Q8WW24 435 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 CRELD1Q96HD1 420 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 ZNF599Q96NL3 588 aa20.82■□□□□ 0.92
SDCBP-209ENST00000522243 URB1O60287 2271 aaKnown RBP20.81■□□□□ 0.92
SDCBP-209ENST00000522243 YY2O15391 372 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 BRINP1O60477 761 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 RECQL5O94762 991 aaPredicted RBP20.81■□□□□ 0.92
SDCBP-209ENST00000522243 PEX11BO96011 259 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 CTSEP14091 401 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 TGM2P21980 687 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 GJC1P36383 396 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 PEX5P50542 639 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 CDH6P55285 790 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 MAXP61244 160 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 KRT81Q14533 505 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 NFATC4Q14934 902 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 NR0B2Q15466 257 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 PERM1Q5SV97 790 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 CPNE8Q86YQ8 564 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 SLC35F3Q8IY50 421 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 ATPAF2Q8N5M1 289 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 PDCD6IPQ8WUM4 868 aaKnown RBP20.81■□□□□ 0.92
SDCBP-209ENST00000522243 IQCDQ96DY2 449 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 DEPDC7Q96QD5 511 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 BOCQ9BWV1 1114 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms