RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 IGFBPL1Q8WX77 278 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 ZSCAN31Q96LW9 406 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-209ENST00000521559 PIMREGQ9BSJ6 248 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 UBA5Q9GZZ9 404 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 RANBP17Q9H2T7 1088 aaKnown RBP3.51□□□□□ -1.85
VPS13B-209ENST00000521559 MLXIPQ9HAP2 919 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 SLC38A10Q9HBR0 1119 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 VAT1LQ9HCJ6 419 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 TXNRD2Q9NNW7 524 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 KCNK9Q9NPC2 374 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 THSD1Q9NS62 852 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 RBM28Q9NW13 759 aaKnown RBP3.51□□□□□ -1.85
VPS13B-209ENST00000521559 MSRB1Q9NZV6 116 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 MORF4L1Q9UBU8 362 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 TAGLN3Q9UI15 199 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 MAD2L2Q9UI95 211 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 ZNF580Q9UK33 172 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 PNMA2Q9UL42 364 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 ISY1Q9ULR0 285 aaKnown RBP3.51□□□□□ -1.85
VPS13B-209ENST00000521559 NAP1L2Q9ULW6 460 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-209ENST00000521559 PCDHA12Q9UN75 941 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 COG5Q9UP83 839 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 LRCH1Q9Y2L9 728 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 DTNAQ9Y4J8 743 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 MYH13Q9UKX3 1938 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 LOC102724159A0A0B4J2E5 919 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 GXYLT2A0PJZ3 443 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 C3orf70A6NLC5 250 aaPredicted RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CPLX1O14810 134 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CYTH3O43739 400 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 STRNO43815 780 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 DHX16O60231 1041 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 EIF3JO75822 258 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 EPN2O95208 641 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 PLEKHA8P1O95397 391 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 SLC25A27O95847 323 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 ALDOAP04075 364 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 ICAM1P05362 532 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 ITGA5P08648 1049 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 HSPA1AP0DMV8 641 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 HSPA1BP0DMV9 641 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 HSPA8P11142 646 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 IFNAR1P17181 557 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 SERPINB3P29508 390 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 MAPK4P31152 587 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CIITAP33076 1130 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 COPB2P35606 906 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CDKN2AP42771 156 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CTCFP49711 727 aaPredicted RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 METAP2P50579 478 aaKnown RBP eCLIP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 SNAP25P60880 206 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 SP3Q02447 781 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 TRAF1Q13077 416 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 PTGR1Q14914 329 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 ARHGEF6Q15052 776 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 PWP2Q15269 919 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CDC37Q16543 378 aaPredicted RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 ME3Q16798 604 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 C10orf62Q5T681 223 aaPredicted RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 KIAA1161Q6NSJ0 714 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 MSANTD2Q6P1R3 559 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 ZNF549Q6P9A3 640 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CCDC174Q6PII3 467 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CPLX2Q6PUV4 134 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CRELD2Q6UXH1 353 aaPredicted RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 TMTC3Q6ZXV5 915 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 MYLK4Q86YV6 388 aaPredicted RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 EXOC8Q8IYI6 725 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CPXCR1Q8N123 301 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 TMEM199Q8N511 208 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 ANKRD13CQ8N6S4 541 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 NECAB1Q8N987 351 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 SLC22A17Q8WUG5 538 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 SNX21Q969T3 373 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 RRP36Q96EU6 259 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 ERO1AQ96HE7 468 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 GPR78Q96P69 363 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 PIGSQ96S52 555 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 ARPC5LQ9BPX5 153 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 WDR83Q9BRX9 315 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 PAGR1Q9BTK6 254 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 SPZ1Q9BXG8 430 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 MOV10L1Q9BXT6 1211 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 TEX13BQ9BXU2 312 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 SPATC1LQ9H0A9 340 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 HIPK2Q9H2X6 1198 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CPVLQ9H3G5 476 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 MROH8Q9H579 483 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 SFXN1Q9H9B4 322 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 JMJD4Q9H9V9 463 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 RAVER2Q9HCJ3 691 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 FNIP2Q9P278 1114 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 MAGED2Q9UNF1 606 aaPredicted RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 B3GNT3Q9Y2A9 372 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 RIPK3Q9Y572 518 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 DDX60LQ5H9U9 1706 aaKnown RBP3.5□□□□□ -1.85
VPS13B-209ENST00000521559 NID2Q14112 1375 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 CACNA1IQ9P0X4 2223 aa3.5□□□□□ -1.85
VPS13B-209ENST00000521559 TMEM272A0A1B0GTI8 110 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 SLC15A5A6NIM6 579 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms