RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 GORASP1Q9BQQ3 440 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 IL1RL2Q9HB29 575 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 PFDN6O15212 129 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 CD3EAPO15446 510 aaKnown RBP11.43□□□□□ -0.58
CLK4-206ENST00000520878 STAMBPO95630 424 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 GABRB3P28472 473 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 WEE1P30291 646 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 EPHB3P54753 998 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 PFKFB4Q16877 469 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 PARP15Q460N3 678 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 TXNDC8Q6A555 127 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 RANBP10Q6VN20 620 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 PHTF2Q8N3S3 785 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 PXYLP1Q8TE99 480 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 WDR60Q8WVS4 1066 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 AGO1Q9UL18 857 aaKnown RBP11.43□□□□□ -0.58
CLK4-206ENST00000520878 ANKRD6Q9Y2G4 727 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 SLC30A1Q9Y6M5 507 aa11.43□□□□□ -0.58
CLK4-206ENST00000520878 C2orf78A6NCI8 922 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 HDAC3O15379 428 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 DLX3O60479 287 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 GOT2P00505 430 aaKnown RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 PRSS56P0CW18 603 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 IL10RBQ08334 325 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 SLC20A2Q08357 652 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 UMODL1-AS1Q8N2C9 162 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 C1orf74Q96LT6 269 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 PKMYT1Q99640 499 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 TMEM248Q9NWD8 314 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 MARCH5Q9NX47 278 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 PCDHB12Q9Y5F1 795 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 LRRC37A2A6NM11 1700 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 MAP3K7O43318 606 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 COCHO43405 550 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 CRTAMO95727 393 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 LMNAP02545 664 aaKnown RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 LTA4HP09960 611 aaKnown RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 SLC35E2BP0CK96 405 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 MAGEA11P43364 429 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 PKNOX1P55347 436 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 YBEYP58557 167 aaPredicted RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 STX1BP61266 288 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 RIPK1Q13546 671 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 GRAMD1BQ3KR37 738 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 BNIPLQ7Z465 357 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 RAB3IL1Q8TBN0 382 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 PYDC1Q8WXC3 89 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 MYEOVQ96EZ4 313 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 ZNF419Q96HQ0 510 aaPredicted RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 CATSPERZQ9NTU4 200 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 MARCH4Q9P2E8 410 aaPredicted RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 ARHGAP26Q9UNA1 814 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 C15orf41Q9Y2V0 281 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 CCDC162PA2VCL2 907 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 LRG1P02750 347 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 HTR7P34969 479 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 FAM189BP81408 668 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 SERINC3Q13530 473 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 MSANTD2Q6P1R3 559 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 MRPS31Q92665 395 aaKnown RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 ASIC4Q96FT7 647 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 LENG8Q96PV6 779 aaPredicted RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 NOL6Q9H6R4 1146 aaKnown RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 CCDC167Q9P0B6 97 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 AFF4Q9UHB7 1163 aaKnown RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 ZDHHC2Q9UIJ5 367 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 LSM7Q9UK45 103 aaKnown RBP11.42□□□□□ -0.58
CLK4-206ENST00000520878 RAP2CQ9Y3L5 183 aa11.42□□□□□ -0.58
CLK4-206ENST00000520878 KIF3CO14782 793 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 SNX2O60749 519 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 RBP1P09455 135 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 GABRR2P28476 465 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 PTDSS1P48651 473 aaKnown RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 POU4F1Q01851 419 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 TBL3Q12788 808 aaKnown RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 PTPRNQ16849 979 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 ACSBG2Q5FVE4 666 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 WASHC2DQ5SRD0 308 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 ATXN7L2Q5T6C5 722 aaPredicted RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 KIAA0930Q6ICG6 404 aaPredicted RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 RIPOR1Q6ZS17 1223 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 DNAJB7Q7Z6W7 309 aaPredicted RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 ULK2Q8IYT8 1036 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 OR4L1Q8NH43 312 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 ESAMQ96AP7 390 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 IMP4Q96G21 291 aaKnown RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 SLC39A13Q96H72 371 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 MRPL57Q9BQC6 102 aaKnown RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 OXSMQ9NWU1 459 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 NDE1Q9NXR1 346 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 FCF1Q9Y324 198 aaKnown RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 SNNO75324 88 aaPredicted RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 ATF6P18850 670 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 ATP5F1P24539 256 aaPredicted RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 AP2B1P63010 937 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 CLEC6AQ6EIG7 209 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 DENND5AQ6IQ26 1287 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 ZYG11AQ6WRX3 759 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 MFN1Q8IWA4 741 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 DCBLD1Q8N8Z6 715 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms