RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 ADRA1AP35348 466 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 ABL2P42684 1182 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 PTGIRP43119 386 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 PTPN5P54829 565 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 SEMA5AQ13591 1074 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 POM121L1PQ3SYA9 428 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 ZC3H14Q6PJT7 736 aaKnown RBP17.52■□□□□ 0.4
TRAM1-203ENST00000520700 OR14C36Q8NHC7 312 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 CCHCR1Q8TD31 782 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 SRPK1Q96SB4 655 aaKnown RBP17.52■□□□□ 0.4
TRAM1-203ENST00000520700 ETNK1Q9HBU6 452 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 ARNT2Q9HBZ2 717 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 CHKBQ9Y259 395 aa17.52■□□□□ 0.4
TRAM1-203ENST00000520700 A0A0J9YYE9 177 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 H0Y858 1186 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 PMPCBO75439 489 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 SUN1O94901 812 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 SEMA4FO95754 770 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 TRBC1P01850 177 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 ZSCAN5DPP0CG00 497 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 HLA-DPA1P20036 260 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 XPAP23025 273 aaPredicted RBP17.51■□□□□ 0.39
TRAM1-203ENST00000520700 MAGEA6P43360 314 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 GRIA4P48058 902 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 CCR5P51681 352 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 DHX34Q14147 1143 aaKnown RBP17.51■□□□□ 0.39
TRAM1-203ENST00000520700 CCDC70Q6NSX1 233 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 ERAP2Q6P179 960 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 DPPA4Q7L190 304 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 TRIM69Q86WT6 500 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 RAVER1Q8IY67 606 aaKnown RBP17.51■□□□□ 0.39
TRAM1-203ENST00000520700 CBARPQ8N350 705 aaPredicted RBP17.51■□□□□ 0.39
TRAM1-203ENST00000520700 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.51■□□□□ 0.39
TRAM1-203ENST00000520700 FAM160A2Q8N612 972 aaPredicted RBP17.51■□□□□ 0.39
TRAM1-203ENST00000520700 FRMD1Q8N878 549 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 ASB12Q8WXK4 309 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 FOXJ1Q92949 421 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 LRRC45Q96CN5 670 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 IFT43Q96FT9 208 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 SEMA4AQ9H3S1 761 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 PCDH12Q9NPG4 1184 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 EIF2B3Q9NR50 452 aaKnown RBP17.51■□□□□ 0.39
TRAM1-203ENST00000520700 UBP1Q9NZI7 540 aa17.51■□□□□ 0.39
TRAM1-203ENST00000520700 METTL12A8MUP2 240 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 NDUFS2O75306 463 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 AP2A1O95782 977 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 ATXN1LP0C7T5 689 aaKnown RBP17.5■□□□□ 0.39
TRAM1-203ENST00000520700 BCKDHBP21953 392 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 NUDT1P36639 197 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 MMP12P39900 470 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 CDK16Q00536 496 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 PTK6Q13882 451 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 QPCTQ16769 361 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 PLK5Q496M5 336 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 KIAA1161Q6NSJ0 714 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 USP45Q70EL2 814 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 PRUNE1Q86TP1 453 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 FAM124AQ86V42 546 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 MNS1Q8NEH6 495 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 PDCD6IPQ8WUM4 868 aaKnown RBP17.5■□□□□ 0.39
TRAM1-203ENST00000520700 GPR174Q9BXC1 333 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 LRRC40Q9H9A6 602 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 MAGEE1Q9HCI5 957 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 RAB6BQ9NRW1 208 aa17.5■□□□□ 0.39
TRAM1-203ENST00000520700 TBC1D3DA0A087WVF3 549 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 TBC1D3IA0A087WXS9 549 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 TBC1D3EA0A087X179 549 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 TBC1D3KA0A087X1G2 549 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 TBC1D3FA6NER0 549 aaPredicted RBP17.49■□□□□ 0.39
TRAM1-203ENST00000520700 TBC1D3LB9A6J9 549 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 MAP3K13O43283 966 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 LATO43561 262 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 RHOBTB1O94844 696 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 FGF1P05230 155 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 TBC1D3HP0C7X1 549 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 CYP2A6P11509 494 aaPredicted RBP17.49■□□□□ 0.39
TRAM1-203ENST00000520700 EPHB1P54762 984 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 DR1Q01658 176 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 CREB5Q02930 508 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 AGERQ15109 404 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 SLC1A5Q15758 541 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 TMEM259Q4ZIN3 620 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 PMS2CLQ68D20 193 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 KIAA0895LQ68EN5 471 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 TBC1D3GQ6DHY5 549 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 TBC1D3CQ6IPX1 549 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 NAPEPLDQ6IQ20 393 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 LPCAT2Q7L5N7 544 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 MAATS1Q7Z4T9 603 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 LINC00523Q86TU6 105 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 HORMAD1Q86X24 394 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 KLHL7Q8IXQ5 586 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 TBC1D3Q8IZP1 549 aaPredicted RBP17.49■□□□□ 0.39
TRAM1-203ENST00000520700 IPMKQ8NFU5 416 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 C1QTNF2Q9BXJ5 285 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 EPC1Q9H2F5 836 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 INVSQ9Y283 1065 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 EML5Q05BV3 1969 aa17.49■□□□□ 0.39
TRAM1-203ENST00000520700 FANCMQ8IYD8 2048 aa17.48■□□□□ 0.39
TRAM1-203ENST00000520700 FAM187AA6NFU0 413 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms