RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TNFAIP3P21580 790 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 CHATP28329 748 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 CDC25AP30304 524 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 SHMT1P34896 483 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 GABRB2P47870 512 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 PCYT1AP49585 367 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 CTCFP49711 727 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-213ENST00000519553 CRYZQ08257 329 aaKnown RBP6.29□□□□□ -1.4
PTPN12-213ENST00000519553 DDX10Q13206 875 aaKnown RBP6.29□□□□□ -1.4
PTPN12-213ENST00000519553 TBCEQ15813 527 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-213ENST00000519553 CPLX2Q6PUV4 134 aaKnown RBP6.29□□□□□ -1.4
PTPN12-213ENST00000519553 ATF7IPQ6VMQ6 1270 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 SAMD14Q8IZD0 417 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-213ENST00000519553 FBXL14Q8N1E6 418 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 TDRD7Q8NHU6 1098 aaKnown RBP6.29□□□□□ -1.4
PTPN12-213ENST00000519553 KCNG4Q8TDN1 519 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 FBXL8Q96CD0 374 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 MAGEE1Q9HCI5 957 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 CISD1Q9NZ45 108 aaKnown RBP6.29□□□□□ -1.4
PTPN12-213ENST00000519553 OR6C3Q9NZP0 311 aa6.29□□□□□ -1.4
PTPN12-213ENST00000519553 INTS6Q9UL03 887 aaKnown RBP6.29□□□□□ -1.4
PTPN12-213ENST00000519553 LSM4Q9Y4Z0 139 aaKnown RBP6.29□□□□□ -1.4
PTPN12-213ENST00000519553 A0A1B0GVM2 712 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 DYTNA2CJ06 578 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 SNAP23O00161 211 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 WNT9BO14905 357 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 KCNAB3O43448 404 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 CLEC3BP05452 202 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 PIGAP37287 484 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 TCTN1Q2MV58 587 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 TDRD12Q587J7 1177 aaKnown RBP6.28□□□□□ -1.4
PTPN12-213ENST00000519553 HIST2H2BCQ6DN03 193 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 HIST2H2BDQ6DRA6 164 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 FBXO46Q6PJ61 603 aaPredicted RBP6.28□□□□□ -1.4
PTPN12-213ENST00000519553 LCTLQ6UWM7 567 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 DIS3L2Q8IYB7 885 aaKnown RBP6.28□□□□□ -1.4
PTPN12-213ENST00000519553 OTULINQ96BN8 352 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 PERPQ96FX8 193 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 ZNF479Q96JC4 524 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 SCPEP1Q9HB40 452 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 AGO1Q9UL18 857 aaKnown RBP6.28□□□□□ -1.4
PTPN12-213ENST00000519553 MKLN1Q9UL63 735 aa6.28□□□□□ -1.4
PTPN12-213ENST00000519553 VNN2O95498 520 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 MMP2P08253 660 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 HOXB5P09067 269 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 MLH1P40692 756 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 GNAQP50148 359 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 BNC1Q01954 994 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 TRAF3Q13114 568 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 FHL1Q13642 323 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 FGFBP1Q14512 234 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 GSTA3Q16772 222 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 ANKRD54Q6NXT1 300 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 CDC73Q6P1J9 531 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 DLK2Q6UY11 383 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 DSTYKQ6XUX3 929 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 QSOX2Q6ZRP7 698 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 ZCCHC9Q8N567 271 aaKnown RBP6.27□□□□□ -1.41
PTPN12-213ENST00000519553 PHF21BQ96EK2 531 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 RANBP17Q9H2T7 1088 aaKnown RBP6.27□□□□□ -1.41
PTPN12-213ENST00000519553 SMC4Q9NTJ3 1288 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 IRAK4Q9NWZ3 460 aa6.27□□□□□ -1.41
PTPN12-213ENST00000519553 SEC14L5O43304 696 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 SEC14L2O76054 403 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 NDUFB4O95168 129 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 SNHG28P0DPA3 235 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 ITGB8P26012 769 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 CDAP32320 146 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 CDKN2AP42771 156 aaKnown RBP6.26□□□□□ -1.41
PTPN12-213ENST00000519553 RPL7AP62424 266 aaKnown RBP6.26□□□□□ -1.41
PTPN12-213ENST00000519553 DCTN2Q13561 401 aaKnown RBP6.26□□□□□ -1.41
PTPN12-213ENST00000519553 FAM180BQ6P0A1 224 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 MTSS1LQ765P7 747 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 SHFQ7M4L6 423 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 MAATS1Q7Z4T9 603 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 ZDHHC17Q8IUH5 632 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 BEST2Q8NFU1 509 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 OR14A16Q8NHC5 309 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 TXNDC15Q96J42 360 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 LYZL4Q96KX0 146 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 ESRP2Q9H6T0 727 aaKnown RBP6.26□□□□□ -1.41
PTPN12-213ENST00000519553 BPIFA1Q9NP55 256 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 SLC6A13Q9NSD5 602 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 ABI3Q9P2A4 366 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 AASSQ9UDR5 926 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 CKAP5Q14008 2032 aa6.26□□□□□ -1.41
PTPN12-213ENST00000519553 EVPLQ92817 2033 aa6.25□□□□□ -1.41
PTPN12-213ENST00000519553 A0A1W2PQF6 199 aa6.25□□□□□ -1.41
PTPN12-213ENST00000519553 LRRC53A6NM62 1247 aa6.25□□□□□ -1.41
PTPN12-213ENST00000519553 USP17L23D6RBM5 183 aa6.25□□□□□ -1.41
PTPN12-213ENST00000519553 NGFRP08138 427 aa6.25□□□□□ -1.41
PTPN12-213ENST00000519553 C21orf33P30042 268 aaPredicted RBP6.25□□□□□ -1.41
PTPN12-213ENST00000519553 MAN1A1P33908 653 aa6.25□□□□□ -1.41
PTPN12-213ENST00000519553 RPL3P39023 403 aaKnown RBP6.25□□□□□ -1.41
PTPN12-213ENST00000519553 EGR4Q05215 589 aa6.25□□□□□ -1.41
PTPN12-213ENST00000519553 DSC1Q08554 894 aa6.25□□□□□ -1.41
PTPN12-213ENST00000519553 TMEM115Q12893 351 aaPredicted RBP6.25□□□□□ -1.41
PTPN12-213ENST00000519553 ITGADQ13349 1161 aa6.25□□□□□ -1.41
PTPN12-213ENST00000519553 COL28A1Q2UY09 1125 aa6.25□□□□□ -1.41
PTPN12-213ENST00000519553 MMEL1Q495T6 779 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms