RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 MAPRE3Q9UPY8 281 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 CDK11AQ9UQ88 783 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 OR2W1Q9Y3N9 320 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 GTF3C3Q9Y5Q9 886 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 GPR98Q8WXG9 6306 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 C17orf102A2RUQ5 167 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 M0QYT0 321 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 CLIC2O15247 247 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 PHF1O43189 567 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 LRCH4O75427 683 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 ZRANB2O95218 330 aaKnown RBP eCLIP-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 NADKO95544 446 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 CLDN1O95832 211 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 MMP3P08254 477 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 ARP10275 920 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 IL1R1P14778 569 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 BTF3P20290 206 aaKnown RBP-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 GNL1P36915 607 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 GSTM5P46439 218 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 CARSP49589 748 aaKnown RBP-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 EPHB1P54762 984 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 RIPK4P57078 832 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 ECT2LQ008S8 904 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 RBL2Q08999 1139 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 CAPSQ13938 189 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 PLK5Q496M5 336 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 TBC1D9BQ66K14 1250 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 FAM171BQ6P995 826 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 MFSD6Q6ZSS7 791 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 C16orf86Q6ZW13 317 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 USP45Q70EL2 814 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 CATIPQ7Z7H3 387 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 ADCK1Q86TW2 530 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 WDR63Q8IWG1 891 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 ZDHHC23Q8IYP9 409 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 ZNF34Q8IZ26 560 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 C1orf87Q8N0U7 546 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 PRSS33Q8NF86 280 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 PMM1Q92871 262 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 ESAMQ96AP7 390 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 ARHGEF26Q96DR7 871 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 PHYHIPLQ96FC7 376 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 SCRN2Q96FV2 425 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 FAM227BQ96M60 508 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 C1orf147Q96MC9 270 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 FAM83DQ9H4H8 585 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 ASB8Q9H765 288 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 Q9N2J8 555 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 SIX2Q9NPC8 291 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 PLCL2Q9UPR0 1127 aa-0.15□□□□□ -2.43
RNU6-557P-201ENST00000516842 IGKV1D-17A0A075B6S4 117 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 A0A0G2JLM5 398 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF840PA6NDX5 716 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 K7ESF4 209 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 PLOD2O00469 737 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 SLC22A2O15244 555 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 RNMTO43148 476 aaKnown RBP-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 GPR39O43194 453 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 C22orf31O95567 290 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 NGFP01138 241 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 DHRS4L1P0CG22 281 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 PRKCHP24723 683 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 CLCNKBP51801 687 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 TAS2R38P59533 333 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 RAB1AP62820 205 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 RPL24P83731 157 aaKnown RBP-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 DRP2Q13474 957 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 FAM189A2Q15884 450 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 PTPN21Q16825 1174 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 ABCB5Q2M3G0 1257 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 PGS1Q32NB8 556 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 C3orf38Q5JPI3 329 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 GPATCH4Q5T3I0 446 aaKnown RBP-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 FAM122CQ6P4D5 195 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 RAD9BQ6WBX8 426 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 ASB18Q6ZVZ8 466 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 SHFQ7M4L6 423 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 KRT27Q7Z3Y8 459 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 TMEM200AQ86VY9 491 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 ENTHD1Q8IYW4 607 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 ADPRHL1Q8NDY3 354 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 CEP70Q8NHQ1 597 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 TBC1D22AQ8WUA7 517 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 OVCA2Q8WZ82 227 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 GTF3AQ92664 365 aaKnown RBP-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 ATOH1Q92858 354 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 CDK5RAP3Q96JB5 506 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 TNIP3Q96KP6 325 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 EIF3CQ99613 913 aaKnown RBP-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 PANK3Q9H999 370 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 PRDM11Q9NQV5 511 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 RXFP3Q9NSD7 469 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 SACM1LQ9NTJ5 587 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 FANCLQ9NW38 375 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 CNTN6Q9UQ52 1028 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 PCDHB7Q9Y5E2 793 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 FSIP2Q5CZC0 6907 aa-0.16□□□□□ -2.44
RNU6-557P-201ENST00000516842 A0A087WW49 117 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 CTAGE9A4FU28 777 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 RHPN2P1A8MT19 583 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms