RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 KCNK3O14649 394 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 PPP1R12AO14974 1030 aaPredicted RBP11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 MAGEC1O60732 1142 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 SOCS5O75159 536 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 TM7SF2O76062 418 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 ZNF883P0CG24 379 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 CD59P13987 128 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 PRLRP16471 622 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 AKT2P31751 481 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 C21orf59P57076 290 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 FAM193AP78312 1265 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 IFI35P80217 286 aaPredicted RBP11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 AP1B1Q10567 949 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 UAP1L1Q3KQV9 507 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 TEX44Q53QW1 395 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 LRRC73Q5JTD7 316 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 CFAP58Q5T655 872 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 ERAP2Q6P179 960 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 LAYNQ6UX15 382 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 CCDC50Q8IVM0 306 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 CBARPQ8N350 705 aaPredicted RBP11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 CXorf40AQ8TE69 158 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 SCRN2Q96FV2 425 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 KLHDC7BQ96G42 594 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 HES6Q96HZ4 224 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 ERVMER34-1Q9H9K5 563 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 IL21RQ9HBE5 538 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 PHTF1Q9UMS5 762 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 CA5BQ9Y2D0 317 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 PCDHB9Q9Y5E1 797 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 DCHS1Q96JQ0 3298 aa11.23□□□□□ -0.61
SCARNA20-201ENST00000516768 POM121BA6NF01 834 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 H0Y8X5 98 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 APOC4-APOC2K7ER74 178 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 RAD51BO15315 384 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 DDX3YO15523 660 aaKnown RBP11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 NRDCO43847 1150 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 FZD6O60353 706 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 NEBLO76041 1014 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PGLSO95336 258 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 CER1O95813 267 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 FTCDO95954 541 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PRLP01236 227 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 APOC2P02655 101 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PDHA1P08559 390 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 CCDC175P0C221 793 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PECAM1P16284 738 aaPredicted RBP11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PTPN7P35236 360 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 CETN2P41208 172 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 LIG3P49916 1009 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 CLDN2P57739 230 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 NXPH1P58417 271 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 DSC2Q02487 901 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 NIPAL4Q0D2K0 466 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 TRAF2Q12933 501 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 ZBTB17Q13105 803 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 XRCC4Q13426 336 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 AGERQ15109 404 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 ZNF423Q2M1K9 1284 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PRAMEF14Q5SWL7 426 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 ARMC12Q5T9G4 340 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 LIPIQ6XZB0 460 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 B4GALNT4Q76KP1 1039 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 ABI3BPQ7Z7G0 1075 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PIP4P1Q86T03 277 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 SPATS2Q86XZ4 545 aaKnown RBP11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 DCP2Q8IU60 420 aaKnown RBP11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 UBL4BQ8N7F7 174 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PDCD6IPQ8WUM4 868 aaKnown RBP11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 TFB1MQ8WVM0 346 aaKnown RBP11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PIH1D2Q8WWB5 315 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PCDH15Q96QU1 1955 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 HERPUD2Q9BSE4 406 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 OSBPL8Q9BZF1 889 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 FZD3Q9NPG1 666 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 TM7SF3Q9NS93 570 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 PACSIN2Q9UNF0 486 aaPredicted RBP11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 RAI2Q9Y5P3 530 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 CAPN6Q9Y6Q1 641 aa11.22□□□□□ -0.61
SCARNA20-201ENST00000516768 ASCC3Q8N3C0 2202 aaKnown RBP11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 CABIN1Q9Y6J0 2220 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 ADAMTS9Q9P2N4 1935 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 HACD1B0YJ81 288 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 FPGTO14772 594 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 MTSS1O43312 755 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 PCDHGA12O60330 932 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 TJP3O95049 919 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 PRKCGP05129 697 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 HLA-DQB2P05538 268 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 MMP2P08253 660 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 CSRP1P21291 193 aaKnown RBP11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 MMP12P39900 470 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 RXRGP48443 463 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 SUZ12Q15022 739 aaKnown RBP11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 PRKD1Q15139 912 aaPredicted RBP11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 AADACL2Q6P093 401 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 GCNT7Q6ZNI0 430 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 Q6ZSR6 202 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 DGLUCYQ7Z3D6 616 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 ZC3H18Q86VM9 953 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms