RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 ECHDC3Q96DC8 303 aa17.62■□□□□ 0.41
DDX41-217ENST00000515562 PSKH2Q96QS6 385 aa17.62■□□□□ 0.41
DDX41-217ENST00000515562 LRRC61Q9BV99 259 aa17.62■□□□□ 0.41
DDX41-217ENST00000515562 ABCG4Q9H172 646 aa17.62■□□□□ 0.41
DDX41-217ENST00000515562 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.62■□□□□ 0.41
DDX41-217ENST00000515562 SEPT3Q9UH03 358 aa17.62■□□□□ 0.41
DDX41-217ENST00000515562 CELSR3Q9NYQ7 3312 aa17.62■□□□□ 0.41
DDX41-217ENST00000515562 ANKRD36A6QL64 1941 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 LRRK1Q38SD2 2015 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 CFAP69A5D8W1 941 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 LMO7DNF2Z398 122 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 BUB1BO60566 1050 aaPredicted RBP17.61■□□□□ 0.41
DDX41-217ENST00000515562 IL1R2P27930 398 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 HTR1BP28222 390 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 HSPA9P38646 679 aaKnown RBP17.61■□□□□ 0.41
DDX41-217ENST00000515562 RPIAP49247 311 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 LIG3P49916 1009 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 POLR2LP62875 67 aaKnown RBP17.61■□□□□ 0.41
DDX41-217ENST00000515562 SEMG2Q02383 582 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 PPARDQ03181 441 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 ZNF235Q14590 738 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 LBRQ14739 615 aaKnown RBP17.61■□□□□ 0.41
DDX41-217ENST00000515562 WSCD2Q2TBF2 565 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 FAXCQ5TGI0 409 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 CDCP2Q5VXM1 449 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 ARHGAP36Q6ZRI8 547 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 POLNQ7Z5Q5 900 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 PDZD3Q86UT5 571 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 ZSWIM9Q86XI8 627 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 FSTL5Q8N475 847 aaPredicted RBP17.61■□□□□ 0.41
DDX41-217ENST00000515562 ATL2Q8NHH9 583 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 MAPK15Q8TD08 544 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 TEKT4Q8WW24 435 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 HSPH1Q92598 858 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 THAP2Q9H0W7 228 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 COQ6Q9Y2Z9 468 aa17.61■□□□□ 0.41
DDX41-217ENST00000515562 ITPR1Q14643 2758 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 LZTS3O60299 673 aaPredicted RBP17.6■□□□□ 0.41
DDX41-217ENST00000515562 ANXA6P08133 673 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 MYF5P13349 255 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 PTMSP20962 102 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 SERPINB6P35237 376 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 MTM1Q13496 603 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 NFATC4Q14934 902 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 NR0B2Q15466 257 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 CDKN3Q16667 212 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 C6orf132Q5T0Z8 1188 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 BBS5Q8N3I7 341 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 DCBLD2Q96PD2 775 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 CSPG4P5Q96PW8 444 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 BOCQ9BWV1 1114 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 TCEAL2Q9H3H9 227 aaPredicted RBP17.6■□□□□ 0.41
DDX41-217ENST00000515562 IP6K2Q9UHH9 426 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 ANAPC7Q9UJX3 599 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 PNMA8BQ9ULN7 279 aaPredicted RBP17.6■□□□□ 0.41
DDX41-217ENST00000515562 CAPN11Q9UMQ6 739 aa17.6■□□□□ 0.41
DDX41-217ENST00000515562 LUC7L2Q9Y383 392 aaKnown RBP17.6■□□□□ 0.41
DDX41-217ENST00000515562 URB1O60287 2271 aaKnown RBP17.59■□□□□ 0.41
DDX41-217ENST00000515562 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.59■□□□□ 0.41
DDX41-217ENST00000515562 A0A1W2PQ67 120 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 EME2A4GXA9 379 aaPredicted RBP17.59■□□□□ 0.41
DDX41-217ENST00000515562 BRINP1O60477 761 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 GCATO75600 419 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 ALPIP09923 528 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 ELFN1P0C7U0 828 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 TCF4P15884 667 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 ABCG1P45844 678 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 SCNN1BP51168 640 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 HK3P52790 923 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 ADKP55263 362 aaKnown RBP17.59■□□□□ 0.41
DDX41-217ENST00000515562 ELOCQ15369 112 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 GUSBP11Q6P575 273 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 ATPAF2Q8N5M1 289 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 TPCN2Q8NHX9 752 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 SNIP1Q8TAD8 396 aaKnown RBP17.59■□□□□ 0.41
DDX41-217ENST00000515562 SPOCK2Q92563 424 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 NAT6Q93015 286 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 NUP85Q9BW27 656 aa17.59■□□□□ 0.41
DDX41-217ENST00000515562 CACNA1GO43497 2377 aa17.58■□□□□ 0.41
DDX41-217ENST00000515562 A0A087X0T9 212 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 CPED1A4D0V7 1026 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 TRAFD1O14545 582 aaPredicted RBP17.58■□□□□ 0.4
DDX41-217ENST00000515562 MUSKO15146 869 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 RRP8O43159 456 aaKnown RBP17.58■□□□□ 0.4
DDX41-217ENST00000515562 SOCS5O75159 536 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 CSO75390 466 aaKnown RBP17.58■□□□□ 0.4
DDX41-217ENST00000515562 RASGRP1O95267 797 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 PRKCGP05129 697 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 PCCBP05166 539 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 CYP1A2P05177 515 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 TPM3P06753 285 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 FAM228BP0C875 321 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 RARAP10276 462 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 TSHRP16473 764 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 NFKBIAP25963 317 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 ACTN2P35609 894 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 EIF2S3P41091 472 aaKnown RBP17.58■□□□□ 0.4
DDX41-217ENST00000515562 SLC25A11Q02978 314 aaKnown RBP17.58■□□□□ 0.4
DDX41-217ENST00000515562 SLC10A7Q0GE19 358 aa17.58■□□□□ 0.4
DDX41-217ENST00000515562 RALGDSQ12967 914 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms