RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 LGMNQ99538 433 aa12.58□□□□□ -0.4
PTCD2-210ENST00000515198 SEMA3CQ99985 751 aa12.58□□□□□ -0.4
PTCD2-210ENST00000515198 WRAP53Q9BUR4 548 aaKnown RBP12.58□□□□□ -0.4
PTCD2-210ENST00000515198 IL21RQ9HBE5 538 aa12.58□□□□□ -0.4
PTCD2-210ENST00000515198 NOD2Q9HC29 1040 aa12.58□□□□□ -0.4
PTCD2-210ENST00000515198 FZD3Q9NPG1 666 aa12.58□□□□□ -0.4
PTCD2-210ENST00000515198 TM7SF3Q9NS93 570 aa12.58□□□□□ -0.4
PTCD2-210ENST00000515198 FNDC3AQ9Y2H6 1198 aaKnown RBP12.58□□□□□ -0.4
PTCD2-210ENST00000515198 ATP8A1Q9Y2Q0 1164 aa12.58□□□□□ -0.4
PTCD2-210ENST00000515198 PCDHGC4Q9Y5F7 938 aa12.58□□□□□ -0.4
PTCD2-210ENST00000515198 ADGRG1Q9Y653 693 aa12.58□□□□□ -0.4
PTCD2-210ENST00000515198 HS3ST3A1Q9Y663 406 aa12.58□□□□□ -0.4
PTCD2-210ENST00000515198 CFAP54Q96N23 3096 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 MIF4GDA9UHW6 222 aaKnown RBP12.57□□□□□ -0.4
PTCD2-210ENST00000515198 H0Y8X5 98 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 FPGTO14772 594 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 YKT6O15498 198 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 HTRA2O43464 458 aaPredicted RBP12.57□□□□□ -0.4
PTCD2-210ENST00000515198 CPP00450 1065 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 THEGLP0DJG4 465 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 ITIH2P19823 946 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 CA4P22748 312 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 MMP12P39900 470 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 CCT8P50990 548 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 NOVA1P51513 510 aaKnown RBP12.57□□□□□ -0.4
PTCD2-210ENST00000515198 RWDD2BP57060 319 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 IFI35P80217 286 aaPredicted RBP12.57□□□□□ -0.4
PTCD2-210ENST00000515198 FGL2Q14314 439 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 LLGL1Q15334 1064 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 PPM1JQ5JR12 505 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 ARMC12Q5T9G4 340 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 CCDC181Q5TID7 509 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 ALG1LQ6GMV1 187 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 NT5DC3Q86UY8 548 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 ZSWIM9Q86XI8 627 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 DCP2Q8IU60 420 aaKnown RBP12.57□□□□□ -0.4
PTCD2-210ENST00000515198 NDUFAF2Q8N183 169 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 OXR1Q8N573 874 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 RNF10Q8N5U6 811 aaKnown RBP12.57□□□□□ -0.4
PTCD2-210ENST00000515198 UBL4BQ8N7F7 174 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 LRRN4Q8WUT4 740 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 LENG8Q96PV6 779 aaPredicted RBP12.57□□□□□ -0.4
PTCD2-210ENST00000515198 ELF4Q99607 663 aaPredicted RBP12.57□□□□□ -0.4
PTCD2-210ENST00000515198 ERVMER34-1Q9H9K5 563 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 SEPT10Q9P0V9 454 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 TRIM10Q9UDY6 481 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 CA5BQ9Y2D0 317 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 PCDHB9Q9Y5E1 797 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 PCDHGB2Q9Y5G2 931 aa12.57□□□□□ -0.4
PTCD2-210ENST00000515198 LRRK1Q38SD2 2015 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 A0A1B0GTQ1 180 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 CFAP69A5D8W1 941 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 KCNK1O00180 336 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 KCNK3O14649 394 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 LZTS3O60299 673 aaPredicted RBP12.56□□□□□ -0.4
PTCD2-210ENST00000515198 KCNK5O95279 499 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 JCHAINP01591 159 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 PRKCGP05129 697 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 HLA-DQB2P05538 268 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 CCDC175P0C221 793 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 CYP2A6P11509 494 aaPredicted RBP12.56□□□□□ -0.4
PTCD2-210ENST00000515198 CEACAM1P13688 526 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 CD59P13987 128 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 ARRB1P49407 418 aaPredicted RBP12.56□□□□□ -0.4
PTCD2-210ENST00000515198 CLDN2P57739 230 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 DSC2Q02487 901 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 TRAF2Q12933 501 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 KYAT3Q6YP21 454 aaKnown RBP12.56□□□□□ -0.4
PTCD2-210ENST00000515198 GCNT7Q6ZNI0 430 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 BBS12Q6ZW61 710 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 DPPA4Q7L190 304 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 PTAR1Q7Z6K3 402 aaPredicted RBP12.56□□□□□ -0.4
PTCD2-210ENST00000515198 ABI3BPQ7Z7G0 1075 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 NAXDQ8IW45 347 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTCD2-210ENST00000515198 TFB1MQ8WVM0 346 aaKnown RBP12.56□□□□□ -0.4
PTCD2-210ENST00000515198 NSMCE3Q96MG7 304 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 KLF6Q99612 283 aaPredicted RBP12.56□□□□□ -0.4
PTCD2-210ENST00000515198 IL12RB2Q99665 862 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 PHTF1Q9UMS5 762 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 GUCA1BQ9UMX6 200 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 EFR3BQ9Y2G0 817 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 RAI2Q9Y5P3 530 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 CEP250Q9BV73 2442 aa12.56□□□□□ -0.4
PTCD2-210ENST00000515198 ASCC3Q8N3C0 2202 aaKnown RBP12.56□□□□□ -0.4
PTCD2-210ENST00000515198 WDR87Q6ZQQ6 2873 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 A0A0U1RQJ8 604 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 APOC4-APOC2K7ER74 178 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 RAD51BO15315 384 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 FLRT2O43155 660 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 MTSS1O43312 755 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 PCDHGA12O60330 932 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 PGLSO95336 258 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 APOC2P02655 101 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 ELFN1P0C7U0 828 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 C6P13671 934 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 PECAM1P16284 738 aaPredicted RBP12.55□□□□□ -0.4
PTCD2-210ENST00000515198 PTPN7P35236 360 aa12.55□□□□□ -0.4
PTCD2-210ENST00000515198 RABIFP47224 123 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms