RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PDK2Q15119 407 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 IRF4Q15306 451 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 PROX2Q3B8N5 592 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 TPRG1LQ5T0D9 272 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 MAP7D3Q8IWC1 876 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 ANKRD36A6QL64 1941 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 USP24Q9UPU5 2620 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 KMT2BQ9UMN6 2715 aaPredicted RBP24.66■■□□□ 1.54
SNF8-213ENST00000514929 TTC24A2A3L6 582 aaPredicted RBP24.66■■□□□ 1.54
SNF8-213ENST00000514929 FAM149AA5PLN7 773 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 AKR1B15C9JRZ8 316 aaPredicted RBP24.66■■□□□ 1.54
SNF8-213ENST00000514929 JUNDP17535 347 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 MAN1A1P33908 653 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 DAB2P98082 770 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 MARC1Q5VT66 337 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 MARCH9Q86YJ5 346 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 LRRC49Q8IUZ0 686 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 SLC35G2Q8TBE7 412 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 NUDCD1Q96RS6 583 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 ZNF670Q9BS34 389 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 TRIM5Q9C035 493 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 SCUBE2Q9NQ36 999 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 TDRD6O60522 2096 aaKnown RBP24.66■■□□□ 1.54
SNF8-213ENST00000514929 ASPMQ8IZT6 3477 aa24.66■■□□□ 1.54
SNF8-213ENST00000514929 TRAFD1O14545 582 aaPredicted RBP24.65■■□□□ 1.54
SNF8-213ENST00000514929 TOR1BO14657 336 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 MFSD11O43934 449 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 MMP13P45452 471 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 ILKQ13418 452 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 PAFAH1B3Q15102 231 aaKnown RBP24.65■■□□□ 1.54
SNF8-213ENST00000514929 ANKRD20A8PQ5CZ79 823 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 TMPRSS12Q86WS5 348 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 PGBD5Q8N414 524 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 ZNF548Q8NEK5 533 aaPredicted RBP24.65■■□□□ 1.54
SNF8-213ENST00000514929 PCDH19Q8TAB3 1148 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 PDCD6IPQ8WUM4 868 aaKnown RBP24.65■■□□□ 1.54
SNF8-213ENST00000514929 BTN2A2Q8WVV5 523 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 NSMCE3Q96MG7 304 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 MGME1Q9BQP7 344 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 NLGN3Q9NZ94 848 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 KLF15Q9UIH9 416 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 PCDHGC4Q9Y5F7 938 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 PLXNB3Q9ULL4 1909 aa24.65■■□□□ 1.54
SNF8-213ENST00000514929 SCAMP1O15126 338 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 KRT37O76014 449 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 NEBLO76041 1014 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 GIMD1P0DJR0 217 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 CR2P20023 1033 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 ACP1P24666 158 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 MAXP61244 160 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 EIF2B5Q13144 721 aaKnown RBP24.64■■□□□ 1.54
SNF8-213ENST00000514929 WSCD2Q2TBF2 565 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 NCBP2-AS2Q69YL0 99 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 SARM1Q6SZW1 724 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 DUSP23Q9BVJ7 150 aa24.64■■□□□ 1.54
SNF8-213ENST00000514929 IGF2RP11717 2491 aa24.64■■□□□ 1.53
SNF8-213ENST00000514929 CACNA1BQ00975 2339 aa24.64■■□□□ 1.53
SNF8-213ENST00000514929 A0A1W2PQ67 120 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 CFAP69A5D8W1 941 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 AQP9O43315 295 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 SOCS5O75159 536 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 ELFN1P0C7U0 828 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 HNF1BP35680 557 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 GALNT2Q10471 571 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 RALGDSQ12967 914 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 TBX2Q13207 712 aaPredicted RBP24.63■■□□□ 1.53
SNF8-213ENST00000514929 MACC1Q6ZN28 852 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 RHOT2Q8IXI1 618 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 LMX1AQ8TE12 382 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 NOD2Q9HC29 1040 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 APOBEC3BQ9UH17 382 aaKnown RBP24.63■■□□□ 1.53
SNF8-213ENST00000514929 CSNK1G3Q9Y6M4 447 aa24.63■■□□□ 1.53
SNF8-213ENST00000514929 ARID1BQ8NFD5 2236 aaPredicted RBP24.63■■□□□ 1.53
SNF8-213ENST00000514929 LRRK1Q38SD2 2015 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 SHROOM3Q8TF72 1996 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 A8MX80 341 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 K7ESM1 405 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 MAP3K6O95382 1288 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 CPP00450 1065 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 JUPP14923 745 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 GARSP41250 739 aaKnown RBP24.62■■□□□ 1.53
SNF8-213ENST00000514929 INPP5AQ14642 412 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 AGERQ15109 404 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 RALGPS1Q5JS13 557 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 FAXCQ5TGI0 409 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 LIPIQ6XZB0 460 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 DPPA4Q7L190 304 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 PHACTR4Q8IZ21 702 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 RBFAQ8N0V3 343 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 APOLD1Q96LR9 279 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 CCDC86Q9H6F5 360 aaKnown RBP24.62■■□□□ 1.53
SNF8-213ENST00000514929 NT5MQ9NPB1 228 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 SPASTQ9UBP0 616 aa24.62■■□□□ 1.53
SNF8-213ENST00000514929 HTRA2O43464 458 aaPredicted RBP24.61■■□□□ 1.53
SNF8-213ENST00000514929 RECQL5O94762 991 aaPredicted RBP24.61■■□□□ 1.53
SNF8-213ENST00000514929 PCCBP05166 539 aa24.61■■□□□ 1.53
SNF8-213ENST00000514929 HTR1BP28222 390 aa24.61■■□□□ 1.53
SNF8-213ENST00000514929 ARHGAP25P42331 645 aa24.61■■□□□ 1.53
SNF8-213ENST00000514929 PEX5P50542 639 aa24.61■■□□□ 1.53
SNF8-213ENST00000514929 CLDN6P56747 220 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms