RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 A0A0G2JND7 137 aa15.03■□□□□ -0
VCAN-211ENST00000513984 AURKAO14965 403 aa15.03■□□□□ -0
VCAN-211ENST00000513984 PHGDHO43175 533 aaKnown RBP15.03■□□□□ -0
VCAN-211ENST00000513984 GJA1P17302 382 aa15.03■□□□□ -0
VCAN-211ENST00000513984 ARFIP2P53365 341 aa15.03■□□□□ -0
VCAN-211ENST00000513984 UBE3AQ05086 875 aa15.03■□□□□ -0
VCAN-211ENST00000513984 ILF2Q12905 390 aaKnown RBP15.03■□□□□ -0
VCAN-211ENST00000513984 RALGPS1Q5JS13 557 aa15.03■□□□□ -0
VCAN-211ENST00000513984 CNSTQ6PJW8 725 aa15.03■□□□□ -0
VCAN-211ENST00000513984 LINGO4Q6UY18 593 aa15.03■□□□□ -0
VCAN-211ENST00000513984 CRLF3Q8IUI8 442 aa15.03■□□□□ -0
VCAN-211ENST00000513984 CEP97Q8IW35 865 aa15.03■□□□□ -0
VCAN-211ENST00000513984 MFN1Q8IWA4 741 aa15.03■□□□□ -0
VCAN-211ENST00000513984 CENPLQ8N0S6 344 aaPredicted RBP15.03■□□□□ -0
VCAN-211ENST00000513984 PPP1R14CQ8TAE6 165 aa15.03■□□□□ -0
VCAN-211ENST00000513984 RDH11Q8TC12 318 aa15.03■□□□□ -0
VCAN-211ENST00000513984 ERP27Q96DN0 273 aa15.03■□□□□ -0
VCAN-211ENST00000513984 ELMO2Q96JJ3 720 aa15.03■□□□□ -0
VCAN-211ENST00000513984 DNAJC1Q96KC8 554 aaKnown RBP15.03■□□□□ -0
VCAN-211ENST00000513984 TMEM120AQ9BXJ8 343 aa15.03■□□□□ -0
VCAN-211ENST00000513984 SLC46A2Q9BY10 475 aa15.03■□□□□ -0
VCAN-211ENST00000513984 FBXO6Q9NRD1 293 aaPredicted RBP15.03■□□□□ -0
VCAN-211ENST00000513984 ARHGAP26Q9UNA1 814 aa15.03■□□□□ -0
VCAN-211ENST00000513984 ACOT9Q9Y305 439 aa15.03■□□□□ -0
VCAN-211ENST00000513984 LAMA2P24043 3122 aaKnown RBP15.03■□□□□ -0
VCAN-211ENST00000513984 MYO7AQ13402 2215 aa15.02■□□□□ -0
VCAN-211ENST00000513984 SCN8AQ9UQD0 1980 aa15.02■□□□□ -0
VCAN-211ENST00000513984 G3V2L1 256 aa15.02■□□□□ -0
VCAN-211ENST00000513984 LEFTY2O00292 366 aa15.02■□□□□ -0
VCAN-211ENST00000513984 RPP40O75818 363 aaKnown RBP15.02■□□□□ -0
VCAN-211ENST00000513984 FGF19O95750 216 aa15.02■□□□□ -0
VCAN-211ENST00000513984 SAT1P21673 171 aa15.02■□□□□ -0
VCAN-211ENST00000513984 PSMA3P25788 255 aa15.02■□□□□ -0
VCAN-211ENST00000513984 CCR2P41597 374 aa15.02■□□□□ -0
VCAN-211ENST00000513984 SKIV2L2P42285 1042 aaKnown RBP15.02■□□□□ -0
VCAN-211ENST00000513984 ZNF140P52738 457 aaPredicted RBP15.02■□□□□ -0
VCAN-211ENST00000513984 TAS2R39P59534 338 aa15.02■□□□□ -0
VCAN-211ENST00000513984 NCALDP61601 193 aa15.02■□□□□ -0
VCAN-211ENST00000513984 MPPE1Q53F39 396 aa15.02■□□□□ -0
VCAN-211ENST00000513984 ZNF789Q5FWF6 425 aa15.02■□□□□ -0
VCAN-211ENST00000513984 NCEH1Q6PIU2 408 aa15.02■□□□□ -0
VCAN-211ENST00000513984 PTAR1Q7Z6K3 402 aaPredicted RBP15.02■□□□□ -0
VCAN-211ENST00000513984 TNS4Q8IZW8 715 aa15.02■□□□□ -0
VCAN-211ENST00000513984 MICALL1Q8N3F8 863 aa15.02■□□□□ -0
VCAN-211ENST00000513984 GPR150Q8NGU9 434 aa15.02■□□□□ -0
VCAN-211ENST00000513984 OR6P1Q8NGX9 317 aa15.02■□□□□ -0
VCAN-211ENST00000513984 DDI1Q8WTU0 396 aa15.02■□□□□ -0
VCAN-211ENST00000513984 TBATAQ96M53 351 aa15.02■□□□□ -0
VCAN-211ENST00000513984 TSNARE1Q96NA8 513 aa15.02■□□□□ -0
VCAN-211ENST00000513984 OMDQ99983 421 aa15.02■□□□□ -0
VCAN-211ENST00000513984 ZNF395Q9H8N7 513 aaPredicted RBP15.02■□□□□ -0
VCAN-211ENST00000513984 KCNK4Q9NYG8 393 aa15.02■□□□□ -0
VCAN-211ENST00000513984 RAI2Q9Y5P3 530 aa15.02■□□□□ -0
VCAN-211ENST00000513984 ATG2AQ2TAZ0 1938 aa15.02■□□□□ -0
VCAN-211ENST00000513984 ZNF106Q9H2Y7 1883 aaKnown RBP15.02□□□□□ -0.01
VCAN-211ENST00000513984 A0A087X1B8 175 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 LINC01553A4QN01 128 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 C5orf67F2Z3F1 127 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 CCL22O00626 93 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 CRTAMO95727 393 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 S1PR4O95977 384 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 HSPA1AP0DMV8 641 aaKnown RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 HSPA1BP0DMV9 641 aaKnown RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 RALBP11234 206 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 DDX6P26196 483 aaKnown RBP eCLIP15.01□□□□□ -0.01
VCAN-211ENST00000513984 AVPR1AP37288 418 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 SLC1A6P48664 564 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 RBM20Q5T481 1227 aaKnown RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 CCDC91Q7Z6B0 441 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 RNF135Q8IUD6 432 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 ARID3BQ8IVW6 561 aaPredicted RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 C7orf61Q8IZ16 206 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 TMEM151AQ8N4L1 468 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 GPATCH11Q8N954 259 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 SHKBP1Q8TBC3 707 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 C2orf49Q9BVC5 232 aaPredicted RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 TASP1Q9H6P5 420 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 NLE1Q9NVX2 485 aaPredicted RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 HCFC1R1Q9NWW0 138 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 MARCH4Q9P2E8 410 aaPredicted RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 SPO11Q9Y5K1 396 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 NUP210Q8TEM1 1887 aaPredicted RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 HGSO14964 777 aaPredicted RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 DNAJC6O75061 913 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 KLHL2O95198 593 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 GOT2P00505 430 aaKnown RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 PDHA1P08559 390 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 PIRTP0C851 137 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 MYL2P10916 166 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 HOXA9P31269 272 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 PGGT1BP53609 377 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 RHOAP61586 193 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 TRAF2Q12933 501 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 TAF1AQ15573 450 aaPredicted RBP15.01□□□□□ -0.01
VCAN-211ENST00000513984 TSNAXIP1Q2TAA8 658 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 OR13C4Q8NGS5 318 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 KCTD4Q8WVF5 259 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 ACDQ96AP0 544 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 SKA1Q96BD8 255 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 RMDN1Q96DB5 314 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms