RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 RFX4Q33E94 735 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 ZDHHC17Q8IUH5 632 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 OFCC1Q8IZS5 231 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 ANKRD52Q8NB46 1076 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 MRPL57Q9BQC6 102 aaKnown RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 PRKD2Q9BZL6 878 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 SENP6Q9GZR1 1112 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 TLE6Q9H808 572 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 CCNB1IP1Q9NPC3 277 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 CD320Q9NPF0 282 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 FAM149AA5PLN7 773 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 UNCXA6NJT0 531 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 RECQL5O94762 991 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 T-ENOLP0DO92 83 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 MAGP20916 626 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 SLC7A1P30825 629 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 CAPGP40121 348 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 RGS4P49798 205 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 TYSND1Q2T9J0 566 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 ATAD3BQ5T9A4 648 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 CXCL17Q6UXB2 119 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 FAM9CQ8IZT9 166 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 DENND1AQ8TEH3 1009 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 KLHL32Q96NJ5 620 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 PRDM16Q9HAZ2 1276 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 TRMT6Q9UJA5 497 aaKnown RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 PTBP2Q9UKA9 531 aaKnown RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 VPS9D1Q9Y2B5 631 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 NCF1BA6NI72 391 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 NCF1CA8MVU1 366 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 E5RJQ4 531 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 NCF1P14598 390 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 HNRNPLP14866 589 aaKnown RBP eCLIP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 TPSB2P20231 275 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 NR4A1P22736 598 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 SLC6A3Q01959 620 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 TPSAB1Q15661 275 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 UGCGQ16739 394 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 FAM110CQ1W6H9 321 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 SLC41A1Q8IVJ1 513 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 UTP15Q8TED0 518 aaKnown RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 PKP2Q99959 881 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 RERGLQ9H628 205 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 GMPPBQ9Y5P6 360 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 SOCS7O14512 581 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 ASS1P00966 412 aaKnown RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 GPX6P59796 221 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 NCF4Q15080 339 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 ZRANB3Q5FWF4 1079 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 ARL13AQ5H913 290 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 RHBDF2Q6PJF5 856 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 ARHGAP36Q6ZRI8 547 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 FRMD7Q6ZUT3 714 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 FAM84AQ96KN4 292 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 ZNF670Q9BS34 389 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 SNRNP25Q9BV90 132 aaKnown RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 PTPRHQ9HD43 1115 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 TRPV2Q9Y5S1 764 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 E7ENX8 843 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 MLNP12872 115 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 HALP42357 657 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 LRRC74AQ0VAA2 488 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 MERTKQ12866 999 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 PPM1JQ5JR12 505 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 NT5DC4Q86YG4 428 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 FBXO39Q8N4B4 442 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 NAT8LQ8N9F0 302 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 GRPEL2Q8TAA5 225 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 SHISA4Q96DD7 197 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 DPY30Q9C005 99 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 TMEM216Q9P0N5 145 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 DUSP12Q9UNI6 340 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 AP3M1Q9Y2T2 418 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 PARP4Q9UKK3 1724 aaKnown RBP11.3□□□□□ -0.6
TCOF1-211ENST00000513346 ATP6AP2A0A1C7CYW4 349 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 NOTOA8MTQ0 251 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 ATP6AP2O75787 350 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 TMEM63AO94886 807 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 ANXA6P08133 673 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 LTA4HP09960 611 aaKnown RBP11.3□□□□□ -0.6
TCOF1-211ENST00000513346 FSTL1Q12841 308 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 IL23RQ5VWK5 629 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 ARHGAP17Q68EM7 881 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 SDE2Q6IQ49 451 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 PROSER1Q86XN7 944 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 TCAIMQ8N3R3 496 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 BLOC1S5Q8TDH9 187 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 BIRC8Q96P09 236 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 TSEN34Q9BSV6 310 aaKnown RBP11.3□□□□□ -0.6
TCOF1-211ENST00000513346 GATA5Q9BWX5 397 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-211ENST00000513346 TRMT13Q9NUP7 481 aaKnown RBP11.3□□□□□ -0.6
TCOF1-211ENST00000513346 TMEM9Q9P0T7 183 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 ADAMTS6Q9UKP5 1117 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 C5orf58C9J3I9 102 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 CST1P01037 141 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 CYP1A1P04798 512 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-211ENST00000513346 GPIP06744 558 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 PCNAP12004 261 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 CKMT2P17540 419 aa11.3□□□□□ -0.6
TCOF1-211ENST00000513346 ZNF280AP59817 542 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms