RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PRDM16Q9HAZ2 1276 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 RGL1Q9NZL6 768 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 WRAP73Q9P2S5 460 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 LRIT1Q9P2V4 623 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 UXTQ9UBK9 157 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 DDX25Q9UHL0 483 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 KCNG1Q9UIX4 513 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 CCL26Q9Y258 94 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 ATMQ13315 3056 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 CITO14578 2027 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 AHCTF1Q8WYP5 2266 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 MUC22E2RYF6 1773 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 NBPF19A0A087WUL8 3843 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 IGHV1OR15-9A0A0B4J2B8 117 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 TCRBV21S2A2A0A5A6 115 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 GOLGA8AA7E2F4 631 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 PLK4O00444 970 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ADAMTS3O15072 1205 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 PAPSS1O43252 624 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 XPOTO43592 962 aaKnown RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 NDUFS2O75306 463 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 PRPF6O94906 941 aaKnown RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 KAT7O95251 611 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 FKBP9O95302 570 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 LARGE1O95461 756 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 TDP2O95551 362 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 KLF8O95600 359 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 CSH1P0DML2 217 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 CSH2P0DML3 217 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 MCF2P10911 925 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 SFTPCP11686 197 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 HMGA1P17096 107 aaKnown RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 GABRG2P18507 467 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 CDK11BP21127 795 aaKnown RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 LRPAP1P30533 357 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 OXTRP30559 389 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 NTSR1P30989 418 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 NLRP5P59047 1200 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 PHC1P78364 1004 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 SEMG2Q02383 582 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 NUCB1Q02818 461 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 GRIK2Q13002 908 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 DMP1Q13316 513 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ILKQ13418 452 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 NECTIN1Q15223 517 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ZBTB6Q15916 424 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ZNF77Q15935 545 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 BMT2Q1RMZ1 405 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 HLA-BQ31612 363 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 INAVAQ3KP66 663 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 SPDYE7PQ495Y7 208 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 GLRA4Q5JXX5 417 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ATF7IP2Q5U623 682 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 EMC10Q5UCC4 262 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 RNF219Q5W0B1 726 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 TXNDC8Q6A555 127 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ZNF517Q6ZMY9 492 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 FKBP9P1Q75LS8 142 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 TTC30AQ86WT1 665 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 RAB11FIP4Q86YS3 637 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 FMNL3Q8IVF7 1028 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 EFCAB13Q8IY85 973 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 THEM5Q8N1Q8 247 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 FBXL16Q8N461 479 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 FSIP1Q8NA03 581 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ATAD1Q8NBU5 361 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 SPATA18Q8TC71 538 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 BOD1Q96IK1 185 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 CEP295NLQ96MC4 621 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 CCDC43Q96MW1 224 aaKnown RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ZNF578Q96N58 590 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ZMAT2Q96NC0 199 aaKnown RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 PGLYRP2Q96PD5 576 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 FCRL4Q96PJ5 515 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 SEMA3CQ99985 751 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 POLR3FQ9H1D9 316 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 LINC00597Q9H2U6 94 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 PTPRHQ9HD43 1115 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 FSCN3Q9NQT6 498 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ITM2CQ9NQX7 267 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 OXSMQ9NWU1 459 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ANKMY1Q9P2S6 941 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 PCDHA12Q9UN75 941 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ATP8A1Q9Y2Q0 1164 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 DOPEY2Q9Y3R5 2298 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 NOTCH2Q04721 2471 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 DOPEY1Q5JWR5 2465 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 ATXN2Q99700 1313 aaKnown RBP3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 STK36Q9NRP7 1315 aa3.89□□□□□ -1.79
PDLIM5-218ENST00000513341 COL5A1P20908 1838 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 LRRK2Q5S007 2527 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 KNL1Q8NG31 2342 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 ABCA12Q86UK0 2595 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 hCG_2014768A0A024R1R8 64 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 TRAV19A0A0A6YYK7 116 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 KLF18A0A0U1RQI7 1052 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 FAM149AA5PLN7 773 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 ZNF891A8MT65 544 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 ALG1L2C9J202 215 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 BCAT2O15382 392 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms