RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CA14Q9ULX7 337 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 TBC1D30Q9Y2I9 924 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 IRAK3Q9Y616 596 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 MRPL42Q9Y6G3 142 aaKnown RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 RFX7Q2KHR2 1363 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 WDR97A6NE52 1622 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 PTPN23Q9H3S7 1636 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 HEXBP07686 556 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 MYL9P24844 172 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 PRCPP42785 496 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 PPP2R2BQ00005 443 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 C1QBPQ07021 282 aaKnown RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 SP140Q13342 867 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 PDK2Q15119 407 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 PROSER3Q2NL68 480 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 C9orf64Q5T6V5 341 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 SLC8B1Q6J4K2 584 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 ZNF605Q86T29 641 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 TMEM86AQ8N2M4 240 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 GPR156Q8NFN8 814 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 TM9SF4Q92544 642 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 RIT2Q99578 217 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 PACSIN3Q9UKS6 424 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 SAMD4AQ9UPU9 718 aaKnown RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 CLCA3PQ9Y6N3 262 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 CDH5P33151 784 aaPredicted RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 PSEN1P49768 467 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 ADIGQ0VDE8 80 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 HYIQ5T013 277 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 SLC25A25Q6KCM7 469 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 CHST15Q7LFX5 561 aaPredicted RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 HEXDCQ8WVB3 486 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 AIF1LQ9BQI0 150 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 ARHGEF4Q9NR80 690 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 PSMC3IPQ9P2W1 217 aaPredicted RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 FAM221BA6H8Z2 402 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 FAM172BPA6NC97 362 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 PTPN21Q16825 1174 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ABCA11PQ4W5N1 156 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 PCNX4Q63HM2 1172 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 TTC33Q6PID6 262 aaPredicted RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 C1orf186Q6ZWK4 172 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 SIDT2Q8NBJ9 832 aaKnown RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 ZNF285Q96NJ3 590 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 USP31Q70CQ4 1352 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ATXN2Q99700 1313 aaKnown RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 NDUFA10O95299 355 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 CSF2P04141 144 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 HRGP04196 525 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ZNF16P17020 682 aaPredicted RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 DCKP27707 260 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 TMC5Q6UXY8 1006 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 SATL1Q86VE3 508 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 FEZF2Q8TBJ5 459 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 RFFLQ8WZ73 363 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ERP44Q9BS26 406 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ACAT2Q9BWD1 397 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 TOR4AQ9NXH8 423 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 APEX2Q9UBZ4 518 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 GSTK1Q9Y2Q3 226 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 NEU2Q9Y3R4 380 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 A0A0A6YYK5 440 aaPredicted RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 SMAPO00193 183 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 PDXKO00764 312 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ZBTB7BO15156 539 aaPredicted RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 TBX1O43435 398 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 NUAK1O60285 661 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ACTL6BO94805 426 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 CRYBA1P05813 215 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 FAM58BPP0C7Q3 252 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 PAX7P23759 505 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 GNPDA1P46926 289 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 RPS3AP61247 264 aaKnown RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 ZNF543Q08ER8 600 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ALG10BQ5I7T1 473 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 GDF6Q6KF10 455 aaPredicted RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 SLC30A6Q6NXT4 461 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 COL23A1Q86Y22 540 aaPredicted RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 ZNF100Q8IYN0 542 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 RIBC1Q8N443 379 aaPredicted RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 C2orf73Q8N5S3 287 aaPredicted RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 SPATA20Q8TB22 786 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 SELENOMQ8WWX9 145 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 TTPALQ9BTX7 342 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.97□□□□□ -0.97
VCAN-208ENST00000512590 PLCL2Q9UPR0 1127 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ZNF862O60290 1169 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 GLSO94925 669 aaPredicted RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 INHAP05111 366 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 EIF4EP06730 217 aaKnown RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 CFL1P23528 166 aaKnown RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 SMIM11AP58511 58 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 CAP1Q01518 475 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 LAMTOR4Q0VGL1 99 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 NFATC2Q13469 925 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ITGA7Q13683 1181 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 POU6F1Q14863 301 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 FAM187BQ17R55 369 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 CCDC80Q76M96 950 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 GPSM1Q86YR5 675 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms