RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SEPT14Q6ZU15 432 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 TAS1R1Q7RTX1 841 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 SLC15A3Q8IY34 581 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 LRRC34Q8IZ02 419 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 ACTRT2Q8TDY3 377 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 SLC47A1Q96FL8 570 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 QRFPRQ96P65 431 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 FERMT1Q9BQL6 677 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 SF3B5Q9BWJ5 86 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 KLF16Q9BXK1 252 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 RIBC2Q9H4K1 309 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 LDAHQ9H6V9 325 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 MOCS1Q9NZB8 636 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 EHD2Q9NZN4 543 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 HMGXB4Q9UGU5 601 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 ATPIF1Q9UII2 106 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 GAB2Q9UQC2 676 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 RUVBL1Q9Y265 456 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 NEU2Q9Y3R4 380 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 FAM135BQ49AJ0 1406 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 DIP2AQ14689 1571 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 AHRRA9YTQ3 701 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 F2RL2O00254 374 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 TSPAN4O14817 238 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 SCGB2A1O75556 95 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 RHBDL1O75783 438 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 OR5F1O95221 314 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 CELF2O95319 508 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 AMY1AP04745 511 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 HMBSP08397 361 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 ENO2P09104 434 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 ACAA1P09110 424 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 EPB41P11171 864 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 GJA4P35212 333 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 CTNNB1P35222 781 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 ST8SIA6P61647 398 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 CDC42EP1Q00587 391 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 SPEM2Q0P670 501 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 NCF4Q15080 339 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PGM5Q15124 567 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 EPHA7Q15375 998 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 TRIM60Q495X7 471 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 GPAT3Q53EU6 434 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 C18orf63Q68DL7 685 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 METAP1DQ6UB28 335 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 MAMDC4Q6UXC1 1216 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 KIAA1324Q6UXG2 1013 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 RBM43Q6ZSC3 357 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 TRIM67Q6ZTA4 783 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 CHSY3Q70JA7 882 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 KDM8Q8N371 416 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 TOP6BLQ8N6T0 577 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 GPR161Q8N6U8 529 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 HMGB4Q8WW32 186 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 HOXB13Q92826 284 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 APBB2Q92870 758 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 CELF1Q92879 486 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 MISP3Q96FF7 219 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 LPIN3Q9BQK8 851 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 KIFC3Q9BVG8 833 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 WNT8AQ9H1J5 351 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 EPB41L4BQ9H329 900 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 TREM1Q9NP99 234 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 CNNM1Q9NRU3 951 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 SPATS2LQ9NUQ6 558 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PANK4Q9NVE7 773 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 CLDND1Q9NY35 253 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 SEC63Q9UGP8 760 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 NAGPAQ9UK23 515 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PPIEQ9UNP9 301 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 MYBBP1AQ9BQG0 1328 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 A0A1B0GWJ7 208 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 KCNJ18B7U540 433 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PAPSS1O43252 624 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 OR6B1O95007 311 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 GDF11O95390 407 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 CHEK2O96017 543 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PROCP04070 461 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 CLUP10909 449 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PRKCHP24723 683 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 YY1P25490 414 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 CDKN1BP46527 198 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 KCNJ5P48544 419 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 GPR15P49685 360 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 SLC26A2P50443 739 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 ZNF200P98182 395 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PTSQ03393 145 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 GRAPQ13588 217 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 KCNJ12Q14500 433 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PDIA5Q14554 519 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 ASTE1Q2TB18 679 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 ZNF667Q5HYK9 610 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 EXOSC6Q5RKV6 272 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PRAMEF9Q5VWM5 478 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 TTC23LQ6PF05 361 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PRR23CQ6ZRP0 262 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 TC2NQ8N9U0 490 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 IQUBQ8NA54 791 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 BHLHE23Q8NDY6 225 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms