RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 C21orf59P57076 290 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 GPS2Q13227 327 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 NME3Q13232 169 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 HLTFQ14527 1009 aaKnown RBP eCLIP10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 PDK1Q15118 436 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 PRKD1Q15139 912 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 C4orf17Q53FE4 359 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 PPP6R3Q5H9R7 873 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 CFAP58Q5T655 872 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 NUGGCQ68CJ6 796 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 ATG14Q6ZNE5 492 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 CROCCP2Q86T23 111 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 EXD3Q8N9H8 876 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 IFT81Q8WYA0 676 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 EDEM1Q92611 657 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 BIRC7Q96CA5 298 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 FCRL2Q96LA5 508 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 CCDC114Q96M63 670 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 TKTL2Q9H0I9 626 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 ANLNQ9NQW6 1124 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 GPATCH2LQ9NWQ4 482 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 OSER1Q9NX31 292 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 PAK5Q9P286 719 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 OR12D3Q9UGF7 316 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 ASIC3Q9UHC3 531 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 NUDT5Q9UKK9 219 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 SNX24Q9Y343 169 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 PCDHB1Q9Y5F3 818 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 PPP1R12AO14974 1030 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 CACNG3O60359 315 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 SYNCRIPO60506 623 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 LRIG2O94898 1065 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 TSHRP16473 764 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 COPAP53621 1224 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 EIF3BP55884 814 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 TPI1P60174 286 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 MRPS25P82663 173 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 CDK16Q00536 496 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 INSM1Q01101 510 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 SNX1Q13596 522 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 UBAP2LQ14157 1087 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 TRADDQ15628 312 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 RNASEH2BQ5TBB1 312 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 AFMIDQ63HM1 303 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 TRMT10CQ7L0Y3 403 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 UNC45BQ8IWX7 931 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 KLHDC8BQ8IXV7 354 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 ZNF683Q8IZ20 524 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 ATP6V0D2Q8N8Y2 350 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 HDAC11Q96DB2 347 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 HIC2Q96JB3 615 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 BTN2A3PQ96KV6 586 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 ZNF578Q96N58 590 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 TSGA13Q96PP4 275 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 VAT1Q99536 393 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 SH3GL2Q99962 352 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 FERMT1Q9BQL6 677 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 TMEM121Q9BTD3 319 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 TMEM109Q9BVC6 243 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 NEUROG2Q9H2A3 272 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 PABPC3Q9H361 631 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 CATSPERBQ9H7T0 1116 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 CCSER2Q9H7U1 834 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 WDR70Q9NW82 654 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 OGFRQ9NZT2 677 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 SLC12A6Q9UHW9 1150 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 TPX2Q9ULW0 747 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 SRPK3Q9UPE1 567 aa10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-217ENST00000512274 SPTA1P02549 2419 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 E7ESA3 106 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 TLR5O60602 858 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 MT-CO3P00414 261 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 APOEP02649 317 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 FAM153BP0C7A2 387 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 CISD3P0C7P0 127 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 ERCC2P18074 760 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 ADCY8P40145 1251 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 PLTPP55058 493 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 TBX4P57082 545 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 GABREP78334 506 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 COG7P83436 770 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 PPIDQ08752 370 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 GALNT2Q10471 571 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 SLC10A2Q12908 348 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 BNIP3Q12983 259 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 SHBQ15464 509 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 FAM153CQ494X1 144 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 ARMC3Q5W041 872 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 HIST2H2BCQ6DN03 193 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 GSTA5Q7RTV2 222 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 PPIL6Q8IXY8 311 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 CNPY4Q8N129 248 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 PYROXD2Q8N2H3 581 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 TFB1MQ8WVM0 346 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 PLD4Q96BZ4 506 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 TBC1D31Q96DN5 1066 aa10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 ELF4Q99607 663 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 PRMT1Q99873 361 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-217ENST00000512274 KLC2Q9H0B6 622 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms