RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 HES3Q5TGS1 186 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 TCERG1LQ5VWI1 586 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 E4F1Q66K89 784 aaPredicted RBP6.85□□□□□ -1.31
COPS4-209ENST00000511653 ATL3Q6DD88 541 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 KRBA2Q6ZNG9 492 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 USP30Q70CQ3 517 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 TMPRSS12Q86WS5 348 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 MMAAQ8IVH4 418 aaKnown RBP6.85□□□□□ -1.31
COPS4-209ENST00000511653 CFAP52Q8N1V2 620 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 EID2Q8N6I1 236 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 HJURPQ8NCD3 748 aaPredicted RBP6.85□□□□□ -1.31
COPS4-209ENST00000511653 SAP25Q8TEE9 199 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 GANCQ8TET4 914 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 GOLGA1Q92805 767 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 KAT5Q92993 513 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 TTC17Q96AE7 1141 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 CNDP2Q96KP4 475 aaKnown RBP6.85□□□□□ -1.31
COPS4-209ENST00000511653 FCRL2Q96LA5 508 aaPredicted RBP6.85□□□□□ -1.31
COPS4-209ENST00000511653 DNAI2Q9GZS0 605 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 NEUROG2Q9H2A3 272 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 CAAP1Q9H8G2 361 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 CNGB3Q9NQW8 809 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 INTS7Q9NVH2 962 aaKnown RBP6.85□□□□□ -1.31
COPS4-209ENST00000511653 HESX1Q9UBX0 185 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 USP25Q9UHP3 1055 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 XPO7Q9UIA9 1087 aaKnown RBP6.85□□□□□ -1.31
COPS4-209ENST00000511653 COQ6Q9Y2Z9 468 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 COQ4Q9Y3A0 265 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 RELNP78509 3460 aa6.85□□□□□ -1.31
COPS4-209ENST00000511653 SPENQ96T58 3664 aaKnown RBP6.85□□□□□ -1.31
COPS4-209ENST00000511653 TEX15Q9BXT5 2789 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 TRIM49BA6NDI0 452 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 M0QYV0 167 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 MOCS2O96007 188 aaPredicted RBP6.84□□□□□ -1.31
COPS4-209ENST00000511653 EPB41P11171 864 aaKnown RBP6.84□□□□□ -1.31
COPS4-209ENST00000511653 VDRP11473 427 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 ABCB4P21439 1286 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 ADPRHP54922 357 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 GPR85P60893 370 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 SEMG2Q02383 582 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 TARDBPQ13148 414 aaKnown RBP eCLIP6.84□□□□□ -1.31
COPS4-209ENST00000511653 INAVAQ3KP66 663 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 DCAF6Q58WW2 860 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 PITRM1Q5JRX3 1037 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 MPP7Q5T2T1 576 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 NUGGCQ68CJ6 796 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 TMEM270Q6UE05 265 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 LCLAT1Q6UWP7 414 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 MTDHQ86UE4 582 aaKnown RBP6.84□□□□□ -1.31
COPS4-209ENST00000511653 SPATS2Q86XZ4 545 aaKnown RBP6.84□□□□□ -1.31
COPS4-209ENST00000511653 SCML4Q8N228 414 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 CARNMT1Q8N4J0 409 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 OR2T34Q8NGX1 318 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 FIBINQ8TAL6 211 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 DQX1Q8TE96 717 aaKnown RBP6.84□□□□□ -1.31
COPS4-209ENST00000511653 SLC35F5Q8WV83 523 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 SLC35C1Q96A29 364 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 NXPE2Q96DL1 559 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 MAGEB10Q96LZ2 347 aaPredicted RBP6.84□□□□□ -1.31
COPS4-209ENST00000511653 JMJD8Q96S16 334 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 BRINP2Q9C0B6 783 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 AASDHPPTQ9NRN7 309 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 SUN2Q9UH99 717 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 SLCO3A1Q9UIG8 710 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 NCKAP1Q9Y2A7 1128 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 ZDHHC9Q9Y397 364 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 PCDHGA1Q9Y5H4 931 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 RAI2Q9Y5P3 530 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 PRRC2CQ9Y520 2896 aaKnown RBP6.84□□□□□ -1.31
COPS4-209ENST00000511653 ITIH6Q6UXX5 1313 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 NBPF19A0A087WUL8 3843 aa6.84□□□□□ -1.31
COPS4-209ENST00000511653 EIF4E1BA6NMX2 242 aaKnown RBP6.84□□□□□ -1.32
COPS4-209ENST00000511653 NOTOA8MTQ0 251 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 FADS2P1A8MWK0 482 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 CETN3O15182 167 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 IRAK2O43187 625 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 LDOC1O95751 146 aaPredicted RBP6.84□□□□□ -1.32
COPS4-209ENST00000511653 LTFP02788 710 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 HSP90AA1P07900 732 aaKnown RBP6.84□□□□□ -1.32
COPS4-209ENST00000511653 ZGLP1P0C6A0 271 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 JUPP14923 745 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 CD38P28907 300 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 SLC8A1P32418 973 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 DRD3P35462 400 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 EIF2S3P41091 472 aaKnown RBP6.84□□□□□ -1.32
COPS4-209ENST00000511653 BCL6P41182 706 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 SLC11A2P49281 568 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 NXPH1P58417 271 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 ST8SIA6P61647 398 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 PITX1P78337 314 aaPredicted RBP6.84□□□□□ -1.32
COPS4-209ENST00000511653 PNOCQ13519 176 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 CDH18Q13634 790 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 MS4A13Q5J8X5 152 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 SFMBT2Q5VUG0 894 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 KANSL1Q7Z3B3 1105 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 TAC4Q86UU9 113 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 CIR1Q86X95 450 aaPredicted RBP6.84□□□□□ -1.32
COPS4-209ENST00000511653 HSCBQ8IWL3 235 aa6.84□□□□□ -1.32
COPS4-209ENST00000511653 APCDD1Q8J025 514 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms