RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 STRA8Q7Z7C7 330 aa15.29■□□□□ 0.04
SCLT1-209ENST00000511426 UNC5BQ8IZJ1 945 aa15.29■□□□□ 0.04
SCLT1-209ENST00000511426 C2CD4AQ8NCU7 369 aaPredicted RBP15.29■□□□□ 0.04
SCLT1-209ENST00000511426 OR13J1Q8NGT2 312 aa15.29■□□□□ 0.04
SCLT1-209ENST00000511426 BLOC1S5Q8TDH9 187 aa15.29■□□□□ 0.04
SCLT1-209ENST00000511426 ATXN2LQ8WWM7 1075 aaKnown RBP15.29■□□□□ 0.04
SCLT1-209ENST00000511426 PTPRN2Q92932 1015 aa15.29■□□□□ 0.04
SCLT1-209ENST00000511426 RSPRY1Q96DX4 576 aa15.29■□□□□ 0.04
SCLT1-209ENST00000511426 LRIG1Q96JA1 1093 aa15.29■□□□□ 0.04
SCLT1-209ENST00000511426 NLE1Q9NVX2 485 aaPredicted RBP15.29■□□□□ 0.04
SCLT1-209ENST00000511426 MIA3Q5JRA6 1907 aa15.29■□□□□ 0.04
SCLT1-209ENST00000511426 KIF26AQ9ULI4 1882 aaPredicted RBP15.29■□□□□ 0.04
SCLT1-209ENST00000511426 TTC24A2A3L6 582 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 TRAFD1O14545 582 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 LINC01565O15544 149 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 SMAD6O43541 496 aaKnown RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 ZNF821O75541 412 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 RFPL1O75677 317 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 GJB3O75712 270 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 RPP40O75818 363 aaKnown RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 PIAS1O75925 651 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 CISD3P0C7P0 127 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 NFKBIAP25963 317 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 MAGEA12P43365 314 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 RECQLP46063 649 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 EPHB1P54762 984 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 SEPT7Q16181 437 aaKnown RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 INSCQ1MX18 579 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 CARD16Q5EG05 197 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 ASTLQ6HA08 431 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 MTSS1LQ765P7 747 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 GLT6D1Q7Z4J2 308 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 C4orf33Q8N1A6 199 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 LPCAT1Q8NF37 534 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 GPR150Q8NGU9 434 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 DENND1AQ8TEH3 1009 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 DYDC1Q8WWB3 177 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 LYSMD1Q96S90 227 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 TM6SF2Q9BZW4 377 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 IQCGQ9H095 443 aaKnown RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 EPN3Q9H201 632 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 IARS2Q9NSE4 1012 aaKnown RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 CLEC1BQ9P126 229 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 ERVW-1Q9UQF0 538 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 PCDHGC4Q9Y5F7 938 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 HMX2A2RU54 273 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 H7C0S8 307 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 K7ERQ8 282 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 COPEO14579 308 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 UGT1A9O60656 530 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 ECI2O75521 394 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 DLDP09622 509 aaKnown RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 CREB1P16220 341 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 OGNP20774 298 aaKnown RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 LPOP22079 712 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 RGS19P49795 217 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 ZNF140P52738 457 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-209ENST00000511426 DBN1Q16643 649 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 QPCTQ16769 361 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 MYLK3Q32MK0 819 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 MROH9Q5TGP6 573 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 MRNIPQ6NTE8 343 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 YAF2Q8IY57 180 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 MDM1Q8TC05 714 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 HCAR2Q8TDS4 363 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 ECHDC3Q96DC8 303 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 VPS39Q96JC1 886 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 SERAC1Q96JX3 654 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 GPR22Q99680 433 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 ECT2Q9H8V3 914 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 UGT1A7Q9HAW7 530 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 UGT1A10Q9HAW8 530 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 UGT1A8Q9HAW9 530 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 DEC1Q9P2X7 70 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 VPS9D1Q9Y2B5 631 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 PPIL1Q9Y3C6 166 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 PCDHB9Q9Y5E1 797 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 PSAT1Q9Y617 370 aa15.28■□□□□ 0.04
SCLT1-209ENST00000511426 PFDN6O15212 129 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 GLRA3O75311 464 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 TULP3O75386 442 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 ASMTLO95671 621 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 MPOP05164 745 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 GSTA1P08263 222 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 PYGBP11216 843 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 LAMP2P13473 410 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 PSMC3P17980 439 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 CRHR1P34998 444 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 NEK3P51956 506 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 DLG2Q15700 870 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 DGKKQ5KSL6 1271 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 ATXN7L2Q5T6C5 722 aaPredicted RBP15.27■□□□□ 0.03
SCLT1-209ENST00000511426 GRAMD4Q6IC98 578 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 FSTL4Q6MZW2 842 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 AFTPHQ6ULP2 937 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 VITQ6UXI7 678 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 ZC3HC1Q86WB0 502 aaKnown RBP15.27■□□□□ 0.03
SCLT1-209ENST00000511426 DOCK6Q96HP0 2047 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms