RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TDRD5Q8NAT2 981 aaKnown RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 AVL9Q8NBF6 648 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 POGLUT1Q8NBL1 392 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 GABPB2Q8TAK5 448 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 OSR1Q8TAX0 266 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 DUSP19Q8WTR2 217 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 ATOH1Q92858 354 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 ABHD1Q96SE0 405 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 FAM110AQ9BQ89 295 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 MXRA8Q9BRK3 442 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 TKTL2Q9H0I9 626 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 NDST4Q9H3R1 872 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 GOLGA2P5Q9HBQ8 144 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 PNRC2Q9NPJ4 139 aaKnown RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 SETD4Q9NVD3 440 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 NDRG3Q9UGV2 375 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 AGO2Q9UKV8 859 aaKnown RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 LSM4Q9Y4Z0 139 aaKnown RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 SLC4A4Q9Y6R1 1079 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 A3GALT2U3KPV4 340 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 A0A1W2PR77 199 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 DPPA5A6NC42 116 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 DDTLA6NHG4 134 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 A8MV72 311 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 SMIM22K7EJ46 135 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 RHODO00212 210 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 C1QL1O75973 258 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 MMP3P08254 477 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 QDPRP09417 244 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 VDRP11473 427 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 ACADLP28330 430 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 CXCR3P49682 368 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 PRPF4BQ13523 1007 aaKnown RBP5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 SGO1Q5FBB7 561 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 FCRLBQ6BAA4 426 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 QSOX2Q6ZRP7 698 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 FAM57BQ71RH2 274 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 KBTBD6Q86V97 674 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 TDRPQ86YL5 185 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 KRTAP1-3Q8IUG1 177 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 DENND6AQ8IWF6 608 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 MCEMP1Q8IX19 187 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 RASSF8Q8NHQ8 419 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 FBXL8Q96CD0 374 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 ELMOD3Q96FG2 381 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 PGAP3Q96FM1 320 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 SLC41A2Q96JW4 573 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 PPP1R13BQ96KQ4 1090 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 GCNAQ96QF7 691 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 SIN3AQ96ST3 1273 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 APOL6Q9BWW8 343 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 ZNF341Q9BYN7 854 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 CDT1Q9H211 546 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 ASB6Q9NWX5 421 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 ANKRD10Q9NXR5 420 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 PSD3Q9NYI0 1048 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 C5AR2Q9P296 337 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 CTNNAL1Q9UBT7 734 aa5.62□□□□□ -1.51
HMGB1P47-201ENST00000511281 SLC25A17O43808 307 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 TPPPO94811 219 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 NKX2-2O95096 273 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 HSPA4LO95757 839 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 SCG2P13521 617 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 TRIM21P19474 475 aaKnown RBP5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 STAT2P52630 851 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 ACSM2AQ08AH3 577 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 IKQ13123 557 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 SCARB2Q14108 478 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 MIDNQ504T8 468 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 RARS2Q5T160 578 aaKnown RBP5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 AKNAD1Q5T1N1 836 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 ASPHD1Q5U4P2 390 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 ACSM2BQ68CK6 577 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 LINGO2Q7L985 606 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 WDR63Q8IWG1 891 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 MINDY1Q8N5J2 469 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 DPP10Q8N608 796 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 KDM1BQ8NB78 822 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 GJC3Q8NFK1 279 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 ZNF333Q96JL9 665 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 TMEM47Q9BQJ4 181 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 SRSF8Q9BRL6 282 aaKnown RBP5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 ADPGKQ9BRR6 497 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 WDR83Q9BRX9 315 aaKnown RBP5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 TUBB6Q9BUF5 446 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 NUF2Q9BZD4 464 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 RSPH9Q9H1X1 276 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 OSGEPL1Q9H4B0 414 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 PLK3Q9H4B4 646 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 MVB12BQ9H7P6 319 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 MAGEE1Q9HCI5 957 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 TAB2Q9NYJ8 693 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 CPSF2Q9P2I0 782 aaKnown RBP5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 ANAPC2Q9UJX6 822 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 CMAHPQ9Y471 501 aa5.61□□□□□ -1.51
HMGB1P47-201ENST00000511281 A0A087X1B8 175 aa5.6□□□□□ -1.51
HMGB1P47-201ENST00000511281 TRBV5-3A0A0A0MS03 114 aa5.6□□□□□ -1.51
HMGB1P47-201ENST00000511281 F8W810 466 aa5.6□□□□□ -1.51
HMGB1P47-201ENST00000511281 ADAMDEC1O15204 470 aa5.6□□□□□ -1.51
HMGB1P47-201ENST00000511281 PRPF4O43172 522 aaKnown RBP eCLIP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms