RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 OR5B17Q8NGF7 314 aa10.65□□□□□ -0.71
NEK1-206ENST00000510533 OR52K2Q8NGK3 314 aa10.65□□□□□ -0.71
NEK1-206ENST00000510533 ALG3Q92685 438 aa10.65□□□□□ -0.71
NEK1-206ENST00000510533 UROC1Q96N76 676 aa10.65□□□□□ -0.71
NEK1-206ENST00000510533 C1QTNF7Q9BXJ2 289 aa10.65□□□□□ -0.71
NEK1-206ENST00000510533 DNMT3LQ9UJW3 386 aa10.65□□□□□ -0.71
NEK1-206ENST00000510533 UBE2QL1A1L167 161 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 IDH3BO43837 385 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 ECDO95905 644 aaPredicted RBP10.64□□□□□ -0.71
NEK1-206ENST00000510533 UGT2B15P54855 530 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 CYP4F2P78329 520 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 CYP4F3Q08477 520 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 MTAPQ13126 283 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 CAPSQ13938 189 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 BHLHB9Q6PI77 547 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 FAM220AQ7Z4H9 259 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 IQCKQ8N0W5 287 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PQLC1Q8N2U9 271 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 RASGEF1CQ8N431 466 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 RNASE11Q8TAA1 199 aaKnown RBP10.64□□□□□ -0.71
NEK1-206ENST00000510533 LRRN4Q8WUT4 740 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 ITCHQ96J02 903 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 CASZ1Q86V15 1759 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 CHURC1-FNTBB4DL54 471 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 LIN7AO14910 233 aaPredicted RBP10.64□□□□□ -0.71
NEK1-206ENST00000510533 HAT1O14929 419 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 XYLBO75191 536 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 FGRP09769 529 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PFKPQ01813 784 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 SPIBQ01892 262 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 USP4Q13107 963 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 DPYSQ14117 519 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 TAF13Q15543 124 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PPM1LQ5SGD2 360 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 HECTD3Q5T447 861 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PEG10Q86TG7 708 aaKnown RBP10.64□□□□□ -0.71
NEK1-206ENST00000510533 ZNF655Q8N720 491 aaPredicted RBP10.64□□□□□ -0.71
NEK1-206ENST00000510533 VGLL2Q8N8G2 317 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PPP1R16AQ96I34 528 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PANX1Q96RD7 426 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 RHBGQ9H310 441 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 SLC9A8Q9Y2E8 581 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 BBIP1A8MTZ0 92 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 CBFA2T3O75081 653 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PTPRAP18433 802 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 MATKP42679 507 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PSEN1P49768 467 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 CCDC157Q569K6 752 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 POTEHQ6S545 545 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 COL26A1Q96A83 441 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 EGFL7Q9UHF1 273 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 NRCAMQ92823 1304 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 NR2F1P10589 423 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 ETS2P15036 469 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 VEGFAP15692 232 aaPredicted RBP10.64□□□□□ -0.71
NEK1-206ENST00000510533 RHAGQ02094 409 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 DDR1Q08345 913 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 ZNHIT3Q15649 155 aaPredicted RBP10.64□□□□□ -0.71
NEK1-206ENST00000510533 XKR6Q5GH73 641 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 FKBP1CQ5VVH2 108 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 ATG14Q6ZNE5 492 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PAGE2Q7Z2X7 111 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 AP3S1Q92572 193 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 DGCR14Q96DF8 476 aaKnown RBP10.64□□□□□ -0.71
NEK1-206ENST00000510533 SLC47A1Q96FL8 570 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 NPAS2Q99743 824 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 ATP13A3Q9H7F0 1226 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 MAGEL2Q9UJ55 1249 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PSMD13Q9UNM6 376 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 NCKAP1Q9Y2A7 1128 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 KIAA1210Q9ULL0 1709 aa10.64□□□□□ -0.71
NEK1-206ENST00000510533 PAPSS1O43252 624 aaPredicted RBP10.63□□□□□ -0.71
NEK1-206ENST00000510533 SSNA1O43805 119 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 SLC22A3O75751 556 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 HIST1H2ABP04908 130 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 CDK9P50750 372 aaKnown RBP10.63□□□□□ -0.71
NEK1-206ENST00000510533 GPAT3Q53EU6 434 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 SWT1Q5T5J6 900 aaKnown RBP10.63□□□□□ -0.71
NEK1-206ENST00000510533 RNF44Q7L0R7 432 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 HIST3H2AQ7L7L0 130 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 CMC1Q7Z7K0 106 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 GRIN3AQ8TCU5 1115 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 HIST1H2ACQ93077 130 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 HOPXQ9BPY8 73 aaPredicted RBP10.63□□□□□ -0.71
NEK1-206ENST00000510533 SLC39A8Q9C0K1 460 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 RACGAP1Q9H0H5 632 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 LRRC4CQ9HCJ2 640 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 VWA7Q9Y334 891 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 RFXANKO14593 260 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 GSC2O15499 205 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 OR10H3O60404 316 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 PBX1P40424 430 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 ADCY4Q8NFM4 1077 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 SOCS4Q8WXH5 440 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 SUSD6Q92537 303 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 OR52E6Q96RD3 313 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 TRMOQ9BU70 441 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 S100A14Q9HCY8 104 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 COMMD9Q9P000 198 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 QSOX1O00391 747 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms