RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SCN8AQ9UQD0 1980 aa8.84□□□□□ -0.99
PDLIM5-213ENST00000509357 ADAMTS9Q9P2N4 1935 aa8.84□□□□□ -1
PDLIM5-213ENST00000509357 KNL1Q8NG31 2342 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 PCDH15Q96QU1 1955 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 CCDC66A2RUB6 948 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 TSPAN6O43657 245 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 PCDHGA12O60330 932 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 CBFA2T3O75081 653 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 PAK4O96013 591 aaPredicted RBP8.83□□□□□ -1
PDLIM5-213ENST00000509357 ATXN1LP0C7T5 689 aaKnown RBP8.83□□□□□ -1
PDLIM5-213ENST00000509357 ITIH2P19823 946 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 CXCR5P32302 372 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 ZNF135P52742 658 aaPredicted RBP8.83□□□□□ -1
PDLIM5-213ENST00000509357 CLDN2P57739 230 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 MAXP61244 160 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 PRKD1Q15139 912 aaPredicted RBP8.83□□□□□ -1
PDLIM5-213ENST00000509357 ZNF284Q2VY69 593 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 HS1BP3Q53T59 392 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 TFDP3Q5H9I0 405 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 ZFYVE27Q5T4F4 411 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 BBS12Q6ZW61 710 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 PTAR1Q7Z6K3 402 aaPredicted RBP8.83□□□□□ -1
PDLIM5-213ENST00000509357 IQCHQ86VS3 1027 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 RCOR2Q8IZ40 523 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 TEX26Q8N6G2 289 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 CXorf40AQ8TE69 158 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 COG1Q8WTW3 980 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 MAML1Q92585 1016 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 RAB7BQ96AH8 199 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 HDAC11Q96DB2 347 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 SMIM14Q96QK8 99 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 CINPQ9BW66 212 aaPredicted RBP8.83□□□□□ -1
PDLIM5-213ENST00000509357 SLC17A9Q9BYT1 436 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 OSBPL8Q9BZF1 889 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 KCND1Q9NSA2 647 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 HEY1Q9Y5J3 304 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 FADS3Q9Y5Q0 445 aa8.83□□□□□ -1
PDLIM5-213ENST00000509357 ACACBO00763 2458 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 IGLON5A6NGN9 336 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 KCNK1O00180 336 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 FPGTO14772 594 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 APOL1O14791 398 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 ZNF185O15231 689 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 TNFSF14O43557 240 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 AP1G1O43747 822 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 SDC3O75056 442 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 ZRANB2O95218 330 aaKnown RBP eCLIP8.82□□□□□ -1
PDLIM5-213ENST00000509357 PIGNO95427 931 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 LDOC1O95751 146 aaPredicted RBP8.82□□□□□ -1
PDLIM5-213ENST00000509357 HLA-DQB2P05538 268 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 MMP2P08253 660 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 EPHA8P29322 1005 aaPredicted RBP8.82□□□□□ -1
PDLIM5-213ENST00000509357 CD68P34810 354 aaPredicted RBP8.82□□□□□ -1
PDLIM5-213ENST00000509357 RWDD2BP57060 319 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 IL10RBQ08334 325 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 PPIDQ08752 370 aaKnown RBP8.82□□□□□ -1
PDLIM5-213ENST00000509357 NIPAL4Q0D2K0 466 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 WASHC5Q12768 1159 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 BNIP3Q12983 259 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 GRM3Q14832 879 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 NOMO1Q15155 1222 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 ST3GAL2Q16842 350 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 LRRC73Q5JTD7 316 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 ZNF569Q5MCW4 686 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 UNQ6494/PRO21346Q6UXR6 183 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 DBX2Q6ZNG2 339 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 Q6ZSR6 202 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 PRUNE1Q86TP1 453 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 ZSCAN30Q86W11 494 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 SPATS2Q86XZ4 545 aaKnown RBP8.82□□□□□ -1
PDLIM5-213ENST00000509357 LZTR1Q8N653 840 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 EID2Q8N6I1 236 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 ACTL9Q8TC94 416 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 NSMCE1Q8WV22 266 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 ATG4AQ8WYN0 398 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 FUBP1Q96AE4 644 aaKnown RBP8.82□□□□□ -1
PDLIM5-213ENST00000509357 MS4A14Q96JA4 679 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 CNDP2Q96KP4 475 aaKnown RBP8.82□□□□□ -1
PDLIM5-213ENST00000509357 TSGA13Q96PP4 275 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 BRD8Q9H0E9 1235 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 CAAP1Q9H8G2 361 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 ERVMER34-1Q9H9K5 563 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 GGT7Q9UJ14 662 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 KLK13Q9UKR3 277 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 ZFR2Q9UPR6 939 aaKnown RBP8.82□□□□□ -1
PDLIM5-213ENST00000509357 ITM2BQ9Y287 266 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 NEUROG3Q9Y4Z2 214 aa8.82□□□□□ -1
PDLIM5-213ENST00000509357 TMEM131Q92545 1883 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 CEP295Q9C0D2 2601 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 A0A0U1RQS6 177 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 A6NNZ2 444 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 C1QTNF9BB2RNN3 333 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 TRAFD1O14545 582 aaPredicted RBP8.81□□□□□ -1
PDLIM5-213ENST00000509357 MMP20O60882 483 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 C1QTNF9P0C862 333 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 SERPINA4P29622 427 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 ABL2P42684 1182 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 RENBPP51606 427 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 GDF10P55107 478 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 OTUD4Q01804 1114 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms