RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PRAC2D3DTV9 90 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 K7ENM7 598 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 TULP2O00295 520 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 ITM2AO43736 263 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 ZBED4O75132 1171 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 FAM155BO75949 473 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 CBX6O95503 412 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 METTL18O95568 372 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 LYL1P12980 280 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 AMD1P17707 334 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 C21orf33P30042 268 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 TSPAN7P41732 249 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 VAMP2P63027 116 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 THOC5Q13769 683 aaKnown RBP4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 EFR3AQ14156 821 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 ANKRD1Q15327 319 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 SMAD1Q15797 465 aaKnown RBP4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 SYTL3Q4VX76 610 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 RASGRP2Q7LDG7 609 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 NCSTNQ92542 709 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 NUDT16L1Q9BRJ7 211 aaKnown RBP4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 SDF4Q9BRK5 362 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 PDCL3Q9H2J4 239 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 PLEKHA2Q9HB19 425 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 G6PC2Q9NQR9 355 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 UPB1Q9UBR1 384 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 FBXO40Q9UH90 709 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 IGLV5-37A0A075B6J1 123 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 A0A096LPK6 155 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 OR6C68A6NDL8 312 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 FAM90A20PA6NIJ5 464 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 HBP1O60381 514 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 TIPRLO75663 272 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 TBX18O95935 607 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 IL1AP01583 271 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 TK1P04183 234 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 CFC1BP0CG36 223 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 CFC1P0CG37 223 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 ACP5P13686 325 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 AVPR2P30518 371 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 DPP6P42658 865 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 GPR12P47775 334 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 CASP6P55212 293 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 KRT32Q14532 448 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 HAUS3Q68CZ6 603 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 CPOQ8IVL8 374 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 HERC6Q8IVU3 1022 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 TSPYL6Q8N831 410 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 ANKRD44Q8N8A2 993 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 ZUFSPQ96AP4 578 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 SDCCAG3Q96C92 435 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 ERP27Q96DN0 273 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 GPR63Q9BZJ6 419 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 EGLN1Q9GZT9 426 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 KRT84Q9NSB2 600 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 SUFUQ9UMX1 484 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 GAB2Q9UQC2 676 aa4.39□□□□□ -1.71
TRAPPC13-209ENST00000508304 FSD2A1L4K1 749 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 MAGEA13PA6NCF6 341 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 DDTLA6NHG4 134 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 XPNPEP2O43895 674 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 GFPT2O94808 682 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 RTN3O95197 1032 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 DDX58O95786 925 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 CYP21A2P08686 494 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 PGM1P36871 562 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 ARHGAP8P85298 464 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 CHRNDQ07001 517 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 BYSLQ13895 437 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 FCN2Q15485 313 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 SLC45A4Q5BKX6 768 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 FASTKD5Q7L8L6 764 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 PATL1Q86TB9 770 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 ZNF114Q8NC26 417 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 DBF4BQ8NFT6 615 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 TBC1D22AQ8WUA7 517 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 SNRNP27Q8WVK2 155 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 HERVK_113Q902F9 699 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 ST8SIA4Q92187 359 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 STAMQ92783 540 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 KTI12Q96EK9 354 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 BICD1Q96G01 975 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 LHPPQ9H008 270 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 PAIP1Q9H074 479 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 MMP28Q9H239 520 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 CLIC5Q9NZA1 410 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 GRHL1Q9NZI5 618 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 ORC3Q9UBD5 711 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 MALT1Q9UDY8 824 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 DERAQ9Y315 318 aa4.38□□□□□ -1.71
TRAPPC13-209ENST00000508304 A0A1W2PPH5 198 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 A6NCN8 305 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 KDM4EB2RXH2 506 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 TSPAN3O60637 253 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 HNRNPA1P09651 372 aaKnown RBP eCLIP4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 ARSAP15289 507 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 PAFAH1B1P43034 410 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 MXI1P50539 228 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 MVDP53602 400 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 SETQ01105 290 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms