RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 C11orf54Q9H0W9 315 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 EHD1Q9H4M9 534 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 STN1Q9H668 368 aaKnown RBP3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 OPA3Q9H6K4 179 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 C8orf33Q9H7E9 229 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 MRPL44Q9H9J2 332 aaKnown RBP3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 PARVGQ9HBI0 331 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 CRLF2Q9HC73 371 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 PRDM8Q9NQV8 689 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 MBNL1Q9NR56 388 aaKnown RBP3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 FAM114A2Q9NRY5 505 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 TDP1Q9NUW8 608 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 ZSCAN32Q9NX65 697 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 GDAP2Q9NXN4 497 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 VSX1Q9NZR4 365 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 TRPC4Q9UBN4 977 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 ADAM21Q9UKJ8 722 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 CORO1CQ9ULV4 474 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 PIAS3Q9Y6X2 628 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 COL15A1P39059 1388 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 AOX1Q06278 1338 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 IGSF1Q8N6C5 1336 aa3.7□□□□□ -1.82
HMGB3P15-201ENST00000507326 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 PSMD9O00233 223 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 TNPO2O14787 897 aaKnown RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 TO15178 435 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 NUDT21O43809 227 aaKnown RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 WBP4O75554 376 aaKnown RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 RASSF9O75901 435 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 FLOT1O75955 427 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ALPPP05187 535 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ASGR1P07306 291 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ALPPL2P10696 532 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 CPA1P15085 419 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 FOSL2P15408 326 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 CDH3P22223 829 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 GALP22466 123 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 JAK1P23458 1154 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 KLRC1P26715 233 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 CCND2P30279 289 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 SLC6A4P31645 630 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 HSD17B2P37059 387 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 HARS2P49590 506 aaKnown RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 STAT2P52630 851 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 PRKAA2P54646 552 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 SOX10P56693 466 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 NKX6-1P78426 367 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 BEX3Q00994 111 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 CYP4A11Q02928 519 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 GBE1Q04446 702 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 GPS1Q13098 491 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 SLC13A2Q13183 592 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 THOC5Q13769 683 aaKnown RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 GIT2Q14161 759 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 RCN1Q15293 331 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ZMYND11Q15326 602 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 DPYSL2Q16555 572 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 PROSER3Q2NL68 480 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 PREPLQ4J6C6 727 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ANKRD20A4Q4UJ75 823 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ANKRD20A8PQ5CZ79 823 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 C3orf38Q5JPI3 329 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ANKRD20A2Q5SQ80 823 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ANKRD20A1Q5TYW2 823 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 SFMBT2Q5VUG0 894 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ANKRD20A3Q5VUR7 823 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 LIPMQ5VYY2 423 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 SHEQ5VZ18 495 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 CES4AQ5XG92 561 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ERICH5Q6P6B1 374 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 PAPD4Q6PIY7 484 aaKnown RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 RRM2BQ7LG56 351 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 RASAL3Q86YV0 1011 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 CCDC83Q8IWF9 413 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 CDH26Q8IXH8 852 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ADGRG5Q8IZF4 528 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 VPS52Q8N1B4 723 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 KDM8Q8N371 416 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 DCBLD1Q8N8Z6 715 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 IQUBQ8NA54 791 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 SLC4A11Q8NBS3 891 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ATAD1Q8NBU5 361 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 LEMD2Q8NC56 503 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 NLGN4YQ8NFZ3 816 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 FIBINQ8TAL6 211 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 IFI44Q8TCB0 444 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 HDAC7Q8WUI4 952 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 STAMQ92783 540 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 MOAP1Q96BY2 351 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 C11orf24Q96F05 449 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 PDLIM5Q96HC4 596 aaKnown RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 PGBD1Q96JS3 809 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 C8orf76Q96K31 380 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 GCNAQ96QF7 691 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 CCDC77Q9BR77 488 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 FUZQ9BT04 418 aa3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 THUMPD2Q9BTF0 503 aaKnown RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 MLPHQ9BV36 600 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P15-201ENST00000507326 ACPTQ9BZG2 426 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms