RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ANKRD66B4E2M5 251 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 F5H423 210 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-210ENST00000506767 TSPAN6O43657 245 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 PMPCBO75439 489 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 ADRA1AP35348 466 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 ACTN2P35609 894 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 FDFT1P37268 417 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 PTGIRP43119 386 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 WNT3AP56704 352 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 ELP6Q0PNE2 266 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 TUBB2AQ13885 445 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 PRPSAP1Q14558 356 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 TMEM52BQ4KMG9 183 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 PMS2CLQ68D20 193 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 NEK5Q6P3R8 708 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 GSTA5Q7RTV2 222 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 SPATA4Q8NEY3 305 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 GRK7Q8WTQ7 553 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 SCRN2Q96FV2 425 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 MCCC1Q96RQ3 725 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-210ENST00000506767 TUBB2BQ9BVA1 445 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 EPC1Q9H2F5 836 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 C6orf106Q9H6K1 298 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-210ENST00000506767 ETNK1Q9HBU6 452 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 PCDH12Q9NPG4 1184 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 GGT7Q9UJ14 662 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 MRFAP1Q9Y605 127 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 R4GN57 208 aa12.92□□□□□ -0.34
TCOF1-210ENST00000506767 NUMA1Q14980 2115 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TNRC6BQ9UPQ9 1833 aaKnown RBP12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TBC1D3DA0A087WVF3 549 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TBC1D3IA0A087WXS9 549 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TBC1D3EA0A087X179 549 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TBC1D3KA0A087X1G2 549 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 A0A0J9YYE9 177 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TBC1D3FA6NER0 549 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-210ENST00000506767 ESPNB1AK53 854 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TBC1D3LB9A6J9 549 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 MAP3K13O43283 966 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 NDUFS2O75306 463 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 NDST3O95803 873 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TRBC1P01850 177 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 KRT14P02533 472 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 PRKCGP05129 697 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 ATXN1LP0C7T5 689 aaKnown RBP12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TBC1D3HP0C7X1 549 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 MMP12P39900 470 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 GRIA4P48058 902 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 CCR5P51681 352 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 RPL6Q02878 288 aaKnown RBP12.91□□□□□ -0.34
TCOF1-210ENST00000506767 RALGDSQ12967 914 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 SEMA5AQ13591 1074 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 SIM2Q14190 667 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-210ENST00000506767 PCSK7Q16549 785 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 QPCTQ16769 361 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 WHAMMP3Q1A5X7 153 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 LRRC73Q5JTD7 316 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 FAXCQ5TGI0 409 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 KIAA0895LQ68EN5 471 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TBC1D3GQ6DHY5 549 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TBC1D3CQ6IPX1 549 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 ERAP2Q6P179 960 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 RANBP10Q6VN20 620 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 DPPA4Q7L190 304 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 LPCAT2Q7L5N7 544 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TRIM69Q86WT6 500 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 SLC41A1Q8IVJ1 513 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 TBC1D3Q8IZP1 549 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-210ENST00000506767 CBARPQ8N350 705 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-210ENST00000506767 RUNDC3BQ96NL0 473 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 LYSMD1Q96S90 227 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 ADGRE3Q9BY15 652 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 ZFR2Q9UPR6 939 aaKnown RBP12.91□□□□□ -0.34
TCOF1-210ENST00000506767 ITM2BQ9Y287 266 aa12.91□□□□□ -0.34
TCOF1-210ENST00000506767 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 GOLGA6CA6NDK9 693 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 GOLGA6BA6NDN3 693 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 ERI2A8K979 691 aaKnown RBP12.9□□□□□ -0.34
TCOF1-210ENST00000506767 PSMD3O43242 534 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 LATO43561 262 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 RNGTTO60942 597 aaKnown RBP12.9□□□□□ -0.34
TCOF1-210ENST00000506767 RHOBTB1O94844 696 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 AP2A1O95782 977 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 AGTP01019 485 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 IGHV4-34P06331 123 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 ALPIP09923 528 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 GOLGA6DP0CG33 693 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 XPAP23025 273 aaPredicted RBP12.9□□□□□ -0.34
TCOF1-210ENST00000506767 NFKBIAP25963 317 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 HNF1BP35680 557 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 NBL1P41271 181 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 PPP2CBP62714 309 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 PPP2CAP67775 309 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 FAM193AP78312 1265 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 CKAP4Q07065 602 aaKnown RBP12.9□□□□□ -0.34
TCOF1-210ENST00000506767 GALNT3Q14435 633 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 PTPRRQ15256 657 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 TRIP13Q15645 432 aaPredicted RBP12.9□□□□□ -0.34
TCOF1-210ENST00000506767 SLC1A5Q15758 541 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms