RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 C1QTNF2Q9BXJ5 285 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 TRIM10Q9UDY6 481 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 GGT7Q9UJ14 662 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 SNX11Q9Y5W9 270 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 CFAP69A5D8W1 941 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 IGLON5A6NGN9 336 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 APOC4-APOC2K7ER74 178 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 KCNK1O00180 336 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 FPGTO14772 594 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 GJB3O75712 270 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 ZNF189O75820 626 aaPredicted RBP16.8■□□□□ 0.28
SNCA-209ENST00000506244 APOC2P02655 101 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 HLA-DQB2P05538 268 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 PTMAP06454 111 aaKnown RBP16.8■□□□□ 0.28
SNCA-209ENST00000506244 ARRB1P49407 418 aaPredicted RBP16.8■□□□□ 0.28
SNCA-209ENST00000506244 NXPH1P58417 271 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 BNC1Q01954 994 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 ZNF423Q2M1K9 1284 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 INAVAQ3KP66 663 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 ARMC12Q5T9G4 340 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 NPNTQ6UXI9 565 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 KYAT3Q6YP21 454 aaKnown RBP16.8■□□□□ 0.28
SNCA-209ENST00000506244 USP45Q70EL2 814 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 ZSWIM9Q86XI8 627 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 KLHDC7BQ96G42 594 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 IL12RB2Q99665 862 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 MYOCQ99972 504 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 FERMT1Q9BQL6 677 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 WRAP53Q9BUR4 548 aaKnown RBP16.8■□□□□ 0.28
SNCA-209ENST00000506244 SLC32A1Q9H598 525 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 FZD3Q9NPG1 666 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 GUCA1BQ9UMX6 200 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 PCDHGC4Q9Y5F7 938 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 PCDHGB2Q9Y5G2 931 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 HS3ST3A1Q9Y663 406 aa16.8■□□□□ 0.28
SNCA-209ENST00000506244 TP53BP1Q12888 1972 aaPredicted RBP16.8■□□□□ 0.28
SNCA-209ENST00000506244 HACD1B0YJ81 288 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 MMP20O60882 483 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 PGLSO95336 258 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 FTCDO95954 541 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 JCHAINP01591 159 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 WNT1P04628 370 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 ELFN1P0C7U0 828 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 THEGLP0DJG4 465 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 PECAM1P16284 738 aaPredicted RBP16.79■□□□□ 0.28
SNCA-209ENST00000506244 CSRP1P21291 193 aaKnown RBP16.79■□□□□ 0.28
SNCA-209ENST00000506244 RABIFP47224 123 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 PEX5P50542 639 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 FAM193AP78312 1265 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 CCZ1BP86790 482 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 CCZ1P86791 482 aaPredicted RBP16.79■□□□□ 0.28
SNCA-209ENST00000506244 TRAF2Q12933 501 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 SUZ12Q15022 739 aaKnown RBP16.79■□□□□ 0.28
SNCA-209ENST00000506244 PRKD1Q15139 912 aaPredicted RBP16.79■□□□□ 0.28
SNCA-209ENST00000506244 ZNF662Q6ZS27 426 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 DPPA4Q7L190 304 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 ERMP1Q7Z2K6 904 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 PTAR1Q7Z6K3 402 aaPredicted RBP16.79■□□□□ 0.28
SNCA-209ENST00000506244 ABI3BPQ7Z7G0 1075 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 DCP2Q8IU60 420 aaKnown RBP16.79■□□□□ 0.28
SNCA-209ENST00000506244 OR2I1PQ8NGU4 316 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 ELF4Q99607 663 aaPredicted RBP16.79■□□□□ 0.28
SNCA-209ENST00000506244 OSBPL8Q9BZF1 889 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 ERVMER34-1Q9H9K5 563 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 TM7SF3Q9NS93 570 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 SEPT10Q9P0V9 454 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 DNPEPQ9ULA0 475 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 PHTF1Q9UMS5 762 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 FNDC3AQ9Y2H6 1198 aaKnown RBP16.79■□□□□ 0.28
SNCA-209ENST00000506244 PCDHB9Q9Y5E1 797 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 RAI2Q9Y5P3 530 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 CAPN6Q9Y6Q1 641 aa16.79■□□□□ 0.28
SNCA-209ENST00000506244 A0A0U1RQJ8 604 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 TTC24A2A3L6 582 aaPredicted RBP16.78■□□□□ 0.28
SNCA-209ENST00000506244 DCDC2BA2VCK2 349 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 GOLGA6L9A6NEM1 432 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 TOR1BO14657 336 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 TM4SF5O14894 197 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 WNT9AO14904 365 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 TJP3O95049 919 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 PAK4O96013 591 aaPredicted RBP16.78■□□□□ 0.28
SNCA-209ENST00000506244 CYP2A6P11509 494 aaPredicted RBP16.78■□□□□ 0.28
SNCA-209ENST00000506244 C6P13671 934 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 EPHB1P54762 984 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 RPL26P61254 145 aaKnown RBP16.78■□□□□ 0.28
SNCA-209ENST00000506244 DSC2Q02487 901 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 ZBTB17Q13105 803 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 XRCC4Q13426 336 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 FGL2Q14314 439 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 LLGL1Q15334 1064 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 GCNT7Q6ZNI0 430 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 ALG3Q92685 438 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 QKIQ96PU8 341 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNCA-209ENST00000506244 VAT1Q99536 393 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 HEMGNQ9BXL5 484 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 KCTD5Q9NXV2 234 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 RPL26L1Q9UNX3 145 aaKnown RBP16.78■□□□□ 0.28
SNCA-209ENST00000506244 LAMA1P25391 3075 aa16.78■□□□□ 0.28
SNCA-209ENST00000506244 FLRT2O43155 660 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 LZTS3O60299 673 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms