RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 NDST2P52849 883 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 FMO1Q01740 532 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 BIRC2Q13490 618 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 AGERQ15109 404 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 LRRC73Q5JTD7 316 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 FAM72AQ5TYM5 149 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 FAM72DQ6L9T8 149 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 FAM72BQ86X60 149 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 UMODL1-AS1Q8N2C9 162 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 CCDC185Q8N715 623 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 KIAA1524Q8TCG1 905 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 SLC20A1Q8WUM9 679 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 TTC9Q92623 222 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 TAB2Q9NYJ8 693 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 SSUH2Q9Y2M2 353 aa21.21■□□□□ 0.99
SQSTM1-210ENST00000506042 WASH4PA8MWX3 477 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 DAPK3O43293 454 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 PNLIPP16233 465 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 GLB1P16278 677 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 RFC1P35251 1148 aaPredicted RBP21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 ZNF143P52747 638 aaPredicted RBP21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 C1QBPQ07021 282 aaKnown RBP21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 LY6DQ14210 128 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 INPP5AQ14642 412 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 TPRG1LQ5T0D9 272 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 PHF13Q86YI8 300 aaPredicted RBP21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 KYQ8NBH2 561 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 JOSD2Q8TAC2 188 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 CNPY3Q9BT09 278 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 CLPBQ9H078 707 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 VPS16Q9H269 839 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 TCEAL2Q9H3H9 227 aaPredicted RBP21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 LRRN3Q9H3W5 708 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 CLMPQ9H6B4 373 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 NLRC4Q9NPP4 1024 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 MBNL1Q9NR56 388 aaKnown RBP21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 ATP8A1Q9Y2Q0 1164 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 DGKBQ9Y6T7 804 aa21.2■□□□□ 0.98
SQSTM1-210ENST00000506042 A0A1W2PQ67 120 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 SLC28A2O43868 658 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 ZIC2O95409 532 aaPredicted RBP21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 ELFN1P0C7U0 828 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 LIPCP11150 499 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 CD82P27701 267 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 UGT1A5P35504 534 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 LIG3P49916 1009 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 CLN3Q13286 438 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 ALG11Q2TAA5 492 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 DPY19L2P1Q6NXN4 242 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 WDR59Q6PJI9 974 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 TAF8Q7Z7C8 310 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 PHLDB2Q86SQ0 1253 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 CCNJLQ8IV13 435 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 TSACCQ96A04 125 aaPredicted RBP21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 GANQ9H2C0 597 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 PCDH12Q9NPG4 1184 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 SAMSN1Q9NSI8 373 aaKnown RBP21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 CHMP5Q9NZZ3 219 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 ACSL6Q9UKU0 697 aa21.19■□□□□ 0.98
SQSTM1-210ENST00000506042 TSPAN11A1L157 253 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 TNFRSF10CO14798 259 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 NVLO15381 856 aaKnown RBP21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 PALMO75781 387 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 ITGB2P05107 769 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 PCCBP05166 539 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 UNGP13051 313 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 SLC5A2P31639 672 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 CSNK1DP48730 415 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 RENBPP51606 427 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 ZNF135P52742 658 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 KIAA1024LP59773 190 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 KCNC4Q03721 635 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 BCL2L1Q07817 233 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 RFTN1Q14699 578 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 CLEC16AQ2KHT3 1053 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 WSCD2Q2TBF2 565 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 TMCO4Q5TGY1 634 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 PCSK4Q6UW60 755 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 FAM46DQ8NEK8 389 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 OR56A4Q8NGH8 313 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 ENOX1Q8TC92 643 aaKnown RBP21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 SGF29Q96ES7 293 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 PRR11Q96HE9 360 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 EXOC2Q96KP1 924 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 RBM15Q96T37 977 aaKnown RBP eCLIP21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 CINPQ9BW66 212 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 SP110Q9HB58 689 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 APPL1Q9UKG1 709 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 FZD10Q9ULW2 581 aa21.18■□□□□ 0.98
SQSTM1-210ENST00000506042 CLPPQ16740 277 aaPredicted RBP21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 MANEAQ5SRI9 462 aa21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 ARTNQ5T4W7 220 aa21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 BBS5Q8N3I7 341 aa21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 CCDC112Q8NEF3 446 aa21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 MCEEQ96PE7 176 aa21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 DPEP2Q9H4A9 486 aa21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 LHX3Q9UBR4 397 aa21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 PISDQ9UG56 409 aa21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 NEU3Q9UQ49 428 aa21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 COQ6Q9Y2Z9 468 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms