RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 ZNF91Q05481 1191 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 GRIK3Q13003 919 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 ITGADQ13349 1161 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 CAPSQ13938 189 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 IRF3Q14653 427 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 DRAP1Q14919 205 aaPredicted RBP6.18□□□□□ -1.42
CHD1-204ENST00000505982 TCTN1Q2MV58 587 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 GPR139Q6DWJ6 353 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 LCTLQ6UWM7 567 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 ZNF788Q6ZQV5 615 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 KDELC2Q7Z4H8 507 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 FAM217AQ8IXS0 508 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.18□□□□□ -1.42
CHD1-204ENST00000505982 SAT2Q96F10 170 aaPredicted RBP6.18□□□□□ -1.42
CHD1-204ENST00000505982 MXRA8Q9BRK3 442 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 SEL1LQ9UBV2 794 aa6.18□□□□□ -1.42
CHD1-204ENST00000505982 A8MZ25 164 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 OR2C1O95371 312 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 PRKCGP05129 697 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 ITGAXP20702 1163 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 EPHB2P29323 1055 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 MPGP29372 298 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 UBA7P41226 1012 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 ARHGAP25P42331 645 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 ARHGEF6Q15052 776 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 RAB41Q5JT25 222 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 CEP78Q5JTW2 689 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 C6orf10Q5SRN2 563 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 NCAPH2Q6IBW4 605 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 ZNF66Q6ZN08 573 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 PGAM5Q96HS1 289 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 ZNF333Q96JL9 665 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 AP1M1Q9BXS5 423 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 CDT1Q9H211 546 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 PLEKHA4Q9H4M7 779 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 SPAG4Q9NPE6 437 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 THSD1Q9NS62 852 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 MRPL15Q9P015 296 aaKnown RBP6.17□□□□□ -1.42
CHD1-204ENST00000505982 SUCLA2Q9P2R7 463 aaPredicted RBP6.17□□□□□ -1.42
CHD1-204ENST00000505982 NFKBIL1Q9UBC1 381 aaPredicted RBP6.17□□□□□ -1.42
CHD1-204ENST00000505982 CNOT8Q9UFF9 292 aaKnown RBP6.17□□□□□ -1.42
CHD1-204ENST00000505982 AGO2Q9UKV8 859 aaKnown RBP6.17□□□□□ -1.42
CHD1-204ENST00000505982 LSM4Q9Y4Z0 139 aaKnown RBP6.17□□□□□ -1.42
CHD1-204ENST00000505982 UTYO14607 1347 aa6.17□□□□□ -1.42
CHD1-204ENST00000505982 TAF4O00268 1085 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 HSPB6O14558 160 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 ERAL1O75616 437 aaKnown RBP6.16□□□□□ -1.42
CHD1-204ENST00000505982 MTA2O94776 668 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 MMP3P08254 477 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 PRR35P0CG20 571 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 TMEM11P17152 192 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 SRD5A1P18405 259 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 TNFSF8P32971 234 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 GALCP54803 685 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 PROK1P58294 105 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 ID2Q02363 134 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 SRSF4Q08170 494 aaKnown RBP6.16□□□□□ -1.42
CHD1-204ENST00000505982 PKP1Q13835 747 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 SMTNL2Q2TAL5 461 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 PLEKHO1Q53GL0 409 aaPredicted RBP6.16□□□□□ -1.42
CHD1-204ENST00000505982 FAM133BQ5BKY9 247 aaKnown RBP6.16□□□□□ -1.42
CHD1-204ENST00000505982 PRAMEF19Q5SWL8 479 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 PDXDC1Q6P996 788 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 GLDNQ6ZMI3 551 aaPredicted RBP6.16□□□□□ -1.42
CHD1-204ENST00000505982 PTF1AQ7RTS3 328 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 UBE2Q1Q7Z7E8 422 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 CCDC13Q8IYE1 715 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 ZDHHC23Q8IYP9 409 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 TMTC2Q8N394 836 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 GALNT16Q8N428 558 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 GABPB2Q8TAK5 448 aaPredicted RBP6.16□□□□□ -1.42
CHD1-204ENST00000505982 OTULINQ96BN8 352 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 ARHGEF26Q96DR7 871 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 TMEM68Q96MH6 324 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 B3GNT4Q9C0J1 378 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 MVB12BQ9H7P6 319 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 MAGEE1Q9HCI5 957 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 RANGRFQ9HD47 186 aaPredicted RBP6.16□□□□□ -1.42
CHD1-204ENST00000505982 PDE7BQ9NP56 450 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 ABI3Q9P2A4 366 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 NDRG3Q9UGV2 375 aa6.16□□□□□ -1.42
CHD1-204ENST00000505982 TRBV5-3A0A0A0MS03 114 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 FAM237AA0A1B0GTK4 181 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 CTDSP2O14595 271 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 HS6ST1O60243 411 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 PGM3O95394 542 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 TOP3BO95985 862 aaKnown RBP6.15□□□□□ -1.42
CHD1-204ENST00000505982 ETFAP13804 333 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 ZNF182P17025 639 aaPredicted RBP6.15□□□□□ -1.42
CHD1-204ENST00000505982 CERS1P27544 350 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 ZNF81P51508 661 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 SORDQ00796 357 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 PRPF4BQ13523 1007 aaKnown RBP6.15□□□□□ -1.42
CHD1-204ENST00000505982 NAB2Q15742 525 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 TMEM266Q2M3C6 531 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 BMP2KLQ5H9B9 411 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 CXorf66Q5JRM2 361 aaPredicted RBP6.15□□□□□ -1.42
CHD1-204ENST00000505982 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.42
CHD1-204ENST00000505982 KIAA0930Q6ICG6 404 aaPredicted RBP6.15□□□□□ -1.42
CHD1-204ENST00000505982 NOXA1Q86UR1 476 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms