RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 WHAMMP3Q1A5X7 153 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 ARMCX6Q7L4S7 300 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 KBTBD6Q86V97 674 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 TMEFF1Q8IYR6 380 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 ABCA7Q8IZY2 2146 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 ZBTB44Q8NCP5 570 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 GAB3Q8WWW8 586 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 KLK6Q92876 244 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 IFT43Q96FT9 208 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 SPACA7Q96KW9 195 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 TRIB3Q96RU7 358 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 TRIM51Q9BSJ1 452 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 RAB6BQ9NRW1 208 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 PAK5Q9P286 719 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 FZD4Q9ULV1 537 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 NEU2Q9Y3R4 380 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 FADS3Q9Y5Q0 445 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 MYO15AQ9UKN7 3530 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 TBC1D3DA0A087WVF3 549 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 TBC1D3IA0A087WXS9 549 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 TBC1D3EA0A087X179 549 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 TBC1D3KA0A087X1G2 549 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 TBC1D3FA6NER0 549 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 TBC1D3LB9A6J9 549 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 CCDC188H7C350 402 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 TTI1O43156 1089 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 PLRG1O43660 514 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 NDUFS2O75306 463 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 ZNF189O75820 626 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 ANXA9O76027 345 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 PCDH8O95206 1070 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 ECEL1O95672 775 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 SEMA4FO95754 770 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 TBC1D3HP0C7X1 549 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 OXTRP30559 389 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 MAT2AP31153 395 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 ACTN2P35609 894 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 EPHB1P54762 984 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 PPP2CBP62714 309 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 PPP2CAP67775 309 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 RPL6Q02878 288 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 LMNB2Q03252 620 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 CKAP4Q07065 602 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 SFSWAPQ12872 951 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 GPS1Q13098 491 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 MPP3Q13368 585 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 PPP1R7Q15435 360 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 DNTTIP2Q5QJE6 756 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 TBC1D3GQ6DHY5 549 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 TBC1D3CQ6IPX1 549 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 BRAT1Q6PJG6 821 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 CEP68Q76N32 757 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 TBC1D3Q8IZP1 549 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 PDCD7Q8N8D1 485 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 HCAR2Q8TDS4 363 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 RMDN1Q96DB5 314 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 WRAP53Q9BUR4 548 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 FAM126AQ9BYI3 521 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 SGK2Q9HBY8 427 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 PIH1D1Q9NWS0 290 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 B4GALT6Q9UBX8 382 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 PHTF1Q9UMS5 762 aa13.34□□□□□ -0.27
PDLIM7-212ENST00000504380 DOCK9Q9BZ29 2069 aa13.33□□□□□ -0.27
PDLIM7-212ENST00000504380 LOC285095A0A1B0GVY8 99 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 TCRBV7S3A2A0A539 114 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 NPIPB15A6NHN6 443 aaPredicted RBP13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 NEMP1O14524 444 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 RIOK3O14730 519 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 AREL1O15033 823 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 MMP20O60882 483 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 RNGTTO60942 597 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 LILRB5O75023 590 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 FSBPO95073 299 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 NDST3O95803 873 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 ATXN1LP0C7T5 689 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 CA4P22748 312 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 ADRA1AP35348 466 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 HNF1BP35680 557 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 FDFT1P37268 417 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 GRIA1P42261 906 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 LMAN1P49257 510 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 BASP1P80723 227 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 DR1Q01658 176 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 RALGDSQ12967 914 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 SIM2Q14190 667 aaPredicted RBP13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 SIRPB2Q5JXA9 342 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 SEL1L3Q68CR1 1132 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 DENND2CQ68D51 928 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 KCTD11Q693B1 232 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 PRR23BQ6ZRT6 265 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 ZNF572Q7Z3I7 529 aaPredicted RBP13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 TSPAN33Q86UF1 283 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 SLC41A1Q8IVJ1 513 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 OR2T34Q8NGX1 318 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 GRK7Q8WTQ7 553 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 FEM1CQ96JP0 617 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 HINFPQ9BQA5 517 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 FSD1LQ9BXM9 530 aa13.33□□□□□ -0.28
PDLIM7-212ENST00000504380 PCYOX1Q9UHG3 505 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms