RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	GPNMB	Q14956	572 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	MGAT5B	Q3V5L5	792 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	AGAP9	Q5VTM2	703 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	IRGC	Q6NXR0	463 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	RNF19B	Q6ZMZ0	732 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	SNX32	Q86XE0	403 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	ANKRD49	Q8WVL7	239 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	JADE3	Q92613	823 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	HDAC10	Q969S8	669 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	TSPAN17	Q96FV3	270 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	SRRD	Q9UH36	339 aa		13.12	□□□□□ -0.31
MATR3-233	ENST00000504203	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.12	□□□□□ -0.31
MATR3-233	ENST00000504203		A0A1W2PQ45	241 aa	Predicted RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203		A0A1W2PQY0	241 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	TMEM233	B4DJY2	109 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	ENPP3	O14638	875 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	MUSK	O15146	869 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	OR1E1	P30953	314 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	SLC11A1	P49279	550 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	KLC1	Q07866	573 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	BTG3	Q14201	252 aa	Predicted RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	HERC3	Q15034	1050 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	ACAP2	Q15057	778 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	PDCD2	Q16342	344 aa	Predicted RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	C5orf22	Q49AR2	442 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	PPM1L	Q5SGD2	360 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	TMEM198	Q66K66	360 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	TMEM207	Q6UWW9	146 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	ZNF354C	Q86Y25	554 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	CCDC126	Q96EE4	140 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	SEPT5	Q99719	369 aa	Predicted RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	CCSER2	Q9H7U1	834 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	PDF	Q9HBH1	243 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	VWA7	Q9Y334	891 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	KCTD3	Q9Y597	815 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203		A8MT66	165 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	CCL22	O00626	93 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	SDHD	O14521	159 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	NBN	O60934	754 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	GJB3	O75712	270 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	IPO13	O94829	963 aa	Known RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	ALDH2	P05091	517 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	PDHA1	P08559	390 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	RBP1	P09455	135 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	CCDC166	P0CW27	439 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	TACR2	P21452	398 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	ETFB	P38117	255 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	SLC26A3	P40879	764 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	GATM	P50440	423 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	CDKN2D	P55273	166 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	MRPS35	P82673	323 aa	Known RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	SULT2A1	Q06520	285 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	SMARCB1	Q12824	385 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	RTP2	Q5QGT7	225 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	SH2D4B	Q5SQS7	431 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	LHX8	Q68G74	356 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	FUT10	Q6P4F1	479 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	LRRC8D	Q7L1W4	858 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	SETD3	Q86TU7	594 aa	Predicted RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	ABI1	Q8IZP0	508 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	EFCAB3	Q8N7B9	438 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	PYDC1	Q8WXC3	89 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	CCDC124	Q96CT7	223 aa	Known RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	FEM1C	Q96JP0	617 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	CATSPER2	Q96P56	530 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	SEMA3C	Q99985	751 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	POLR1E	Q9GZS1	481 aa	Known RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	ZBTB26	Q9HCK0	441 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	HCST	Q9UBK5	93 aa		13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	PRPF19	Q9UMS4	504 aa	Known RBP	13.11	□□□□□ -0.31
MATR3-233	ENST00000504203	OR51F1	A6NGY5	319 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	TRPC5OS	A6NMA1	111 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	EIF4E1B	A6NMX2	242 aa	Known RBP	13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	AIM2	O14862	343 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	TLR5	O60602	858 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	BAG2	O95816	211 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	EPO	P01588	193 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.1	□□□□□ -0.31	2e-7	■■□□□ 13
MATR3-233	ENST00000504203	SP100	P23497	879 aa	Predicted RBP	13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	NUDT2	P50583	147 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	PRAME	P78395	509 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	SATB1	Q01826	763 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	CYLC2	Q14093	348 aa	Predicted RBP	13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	ALG1L	Q6GMV1	187 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	KLC3	Q6P597	504 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	LDB1	Q86U70	411 aa	Predicted RBP	13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	RNF135	Q8IUD6	432 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	PELI3	Q8N2H9	469 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	DBF4B	Q8NFT6	615 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	OR6P1	Q8NGX9	317 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	SLC26A7	Q8TE54	656 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	PEX13	Q92968	403 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	STARD7	Q9NQZ5	370 aa		13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	G3BP2	Q9UN86	482 aa	Known RBP	13.1	□□□□□ -0.31
MATR3-233	ENST00000504203	SELP	P16109	830 aa		13.09	□□□□□ -0.31
MATR3-233	ENST00000504203	HLA-DPA1	P20036	260 aa		13.09	□□□□□ -0.31
MATR3-233	ENST00000504203	KCNQ1	P51787	676 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms