RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 ACAP1Q15027 740 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 TCEA2Q15560 299 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 TMCO3Q6UWJ1 677 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 MACC1Q6ZN28 852 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 RD3Q7Z3Z2 195 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 LZTR1Q8N653 840 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 NPWQ8N729 165 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 FAM181AQ8N9Y4 354 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 RFFLQ8WZ73 363 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 DEPDC7Q96QD5 511 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 THAP2Q9H0W7 228 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 SYNDIG1Q9H7V2 258 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.22■■□□□ 1.15
LSM6-203ENST00000503982 NCKIPSDQ9NZQ3 722 aa22.22■■□□□ 1.15
LSM6-203ENST00000503982 RIOK3O14730 519 aaKnown RBP22.21■■□□□ 1.15
LSM6-203ENST00000503982 OPA1O60313 960 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 AMPD1P23109 780 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 HTR1BP28222 390 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 CSNK1DP48730 415 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 ZBED6P86452 979 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 PIGHQ14442 188 aaPredicted RBP22.21■■□□□ 1.15
LSM6-203ENST00000503982 KRT81Q14533 505 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 LBRQ14739 615 aaKnown RBP22.21■■□□□ 1.15
LSM6-203ENST00000503982 NR0B2Q15466 257 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 BOLA3Q53S33 107 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 ENPP7Q6UWV6 458 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 EFL1Q7Z2Z2 1120 aaKnown RBP22.21■■□□□ 1.15
LSM6-203ENST00000503982 HID1Q8IV36 788 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 BBS5Q8N3I7 341 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 NSMCE1Q8WV22 266 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 BTBD6Q96KE9 485 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 SEPT3Q9UH03 358 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 ANAPC7Q9UJX3 599 aa22.21■■□□□ 1.15
LSM6-203ENST00000503982 TSPAN11A1L157 253 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 TMEM110-MUSTN1A8MSY1 372 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 ELFN1P0C7U0 828 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 ABCG1P45844 678 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 HCAR3P49019 387 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 RPIAP49247 311 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 POLR2LP62875 67 aaKnown RBP22.2■■□□□ 1.14
LSM6-203ENST00000503982 DPYSQ14117 519 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 WSCD2Q2TBF2 565 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 TMCO4Q5TGY1 634 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 CRTC1Q6UUV9 634 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 CYP4V2Q6ZWL3 525 aaPredicted RBP22.2■■□□□ 1.14
LSM6-203ENST00000503982 PDZD3Q86UT5 571 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 DCBLD1Q8N8Z6 715 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 ATL2Q8NHH9 583 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 PDCD6IPQ8WUM4 868 aaKnown RBP22.2■■□□□ 1.14
LSM6-203ENST00000503982 NUP85Q9BW27 656 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 IP6K2Q9UHH9 426 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 SALL4Q9UJQ4 1053 aa22.2■■□□□ 1.14
LSM6-203ENST00000503982 LUC7L2Q9Y383 392 aaKnown RBP22.2■■□□□ 1.14
LSM6-203ENST00000503982 A8MX80 341 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 MUSKO15146 869 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 RRP8O43159 456 aaKnown RBP22.19■■□□□ 1.14
LSM6-203ENST00000503982 BRINP1O60477 761 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 GP1BAP07359 652 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 TCF4P15884 667 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 IL1R2P27930 398 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 GJC1P36383 396 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 MMP12P39900 470 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 BLKP51451 505 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 CCDC122Q5T0U0 273 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 AFMIDQ63HM1 303 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 ESRP1Q6NXG1 681 aaKnown RBP22.19■■□□□ 1.14
LSM6-203ENST00000503982 GUSBP11Q6P575 273 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 ZSWIM9Q86XI8 627 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 TP53INP2Q8IXH6 220 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 ATPAF2Q8N5M1 289 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 SCG3Q8WXD2 468 aaKnown RBP22.19■■□□□ 1.14
LSM6-203ENST00000503982 SYN2Q92777 582 aaPredicted RBP22.19■■□□□ 1.14
LSM6-203ENST00000503982 TSACCQ96A04 125 aaPredicted RBP22.19■■□□□ 1.14
LSM6-203ENST00000503982 APOOQ9BUR5 198 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 LRRC61Q9BV99 259 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 SCUBE2Q9NQ36 999 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 GULP1Q9UBP9 304 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 KLQ9UEF7 1012 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 OR1A2Q9Y585 309 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 PCDHB1Q9Y5F3 818 aa22.19■■□□□ 1.14
LSM6-203ENST00000503982 TTC24A2A3L6 582 aaPredicted RBP22.18■■□□□ 1.14
LSM6-203ENST00000503982 TPP1O14773 563 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 CSO75390 466 aaKnown RBP22.18■■□□□ 1.14
LSM6-203ENST00000503982 GCATO75600 419 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 RASGRP1O95267 797 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 RARAP10276 462 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 TSHRP16473 764 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 SERPINB6P35237 376 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 ACTN2P35609 894 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 PEX5P50542 639 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 AP1S1P61966 158 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 NSUN2Q08J23 767 aaKnown RBP eCLIP22.18■■□□□ 1.14
LSM6-203ENST00000503982 TRIM14Q14142 442 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 INPP5AQ14642 412 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 NFATC4Q14934 902 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 RTP5Q14D33 572 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 DPYSL2Q16555 572 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 HGSNATQ68CP4 663 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 POLNQ7Z5Q5 900 aa22.18■■□□□ 1.14
LSM6-203ENST00000503982 CACTIN-AS1Q8N1I8 211 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms