RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CTSKP43235 329 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 ID4P47928 161 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 DSC2Q02487 901 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 OVGP1Q12889 678 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 PUM1Q14671 1186 aaKnown RBP eCLIP18.36■□□□□ 0.533e-7■□□□□ 10.6
PDLIM7-209ENST00000503346 STAT4Q14765 748 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 CXorf40AQ8TE69 158 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 TFB1MQ8WVM0 346 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 PDLIM2Q96JY6 352 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 LENG8Q96PV6 779 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 RAI2Q9Y5P3 530 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 SNX11Q9Y5W9 270 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 CFAP69A5D8W1 941 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 HACD1B0YJ81 288 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 TM4SF5O14894 197 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 FZD6O60353 706 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 MMP20O60882 483 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 PGLSO95336 258 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 PAK4O96013 591 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 C21orf59P57076 290 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 NIPAL4Q0D2K0 466 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 SGCGQ13326 291 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 XRCC4Q13426 336 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 IHHQ14623 411 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 AADACL2Q6P093 401 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 PAF1Q8N7H5 531 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 DENND6BQ8NEG7 585 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 OR2I1PQ8NGU4 316 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 HAUS1Q96CS2 278 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 FZD3Q9NPG1 666 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 LZTFL1Q9NQ48 299 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 PPP2R2CQ9Y2T4 447 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 TTLL3Q9Y4R7 772 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 PCDHB9Q9Y5E1 797 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 HS3ST3A1Q9Y663 406 aa18.35■□□□□ 0.53
PDLIM7-209ENST00000503346 TLR4O00206 839 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 MTSS1O43312 755 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 MAGEC1O60732 1142 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 OPHN1O60890 802 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 TM7SF2O76062 418 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 TJP3O95049 919 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 CER1O95813 267 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 CPP00450 1065 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 PRKCGP05129 697 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 NXPH1P58417 271 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 RALGDSQ12967 914 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 ZNF211Q13398 564 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 NOMO1Q15155 1222 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 HLA-BQ31612 363 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 TEX44Q53QW1 395 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 ARMC12Q5T9G4 340 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 GCNT7Q6ZNI0 430 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 B4GALNT4Q76KP1 1039 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 DPPA4Q7L190 304 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 ABI3BPQ7Z7G0 1075 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 FAM174AQ8TBP5 190 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 PDCD6IPQ8WUM4 868 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 QKIQ96PU8 341 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 KLF6Q99612 283 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 MYOCQ99972 504 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 WRAP53Q9BUR4 548 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 GAREM1Q9H706 876 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 SEPT10Q9P0V9 454 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 PHTF1Q9UMS5 762 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 CA5BQ9Y2D0 317 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 PPIL1Q9Y3C6 166 aa18.34■□□□□ 0.53
PDLIM7-209ENST00000503346 RAD51BO15315 384 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 MMP2P08253 660 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 ZNF883P0CG24 379 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 C6P13671 934 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 NFKBIAP25963 317 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 PTPN3P26045 913 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 LIG3P49916 1009 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 FAM193AP78312 1265 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 OTUD4Q01804 1114 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 WASHC5Q12768 1159 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 SLC14A1Q13336 389 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 ZNF423Q2M1K9 1284 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 CCDC181Q5TID7 509 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 ZC3H18Q86VM9 953 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 ACTL9Q8TC94 416 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 PIH1D2Q8WWB5 315 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 AGAP3Q96P47 875 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 ALS2CR12Q96Q35 445 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 C1QTNF7Q9BXJ2 289 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 TDRD1Q9BXT4 1180 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 CEP41Q9BYV8 373 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 IL21RQ9HBE5 538 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 CEP250Q9BV73 2442 aa18.33■□□□□ 0.52
PDLIM7-209ENST00000503346 CACNA1EQ15878 2313 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 H0Y8X5 98 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 DFNA5O60443 496 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 PDHA1P08559 390 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 CA4P22748 312 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 CLDN2P57739 230 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 SKOR1P84550 965 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 AGERQ15109 404 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 UAP1L1Q3KQV9 507 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 MEI1Q5TIA1 1274 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 KYAT3Q6YP21 454 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms