RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SLC5A3P53794 718 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 CACNA2D1P54289 1103 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 OTUD4Q01804 1114 aaKnown RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 CREMQ03060 361 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 KRT17Q04695 432 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 CLCQ05315 142 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 NME3Q13232 169 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 PTK6Q13882 451 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 DPYSL3Q14195 570 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 CASP8Q14790 479 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 PSMD5Q16401 504 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 DPYSL2Q16555 572 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 ANKRD20A8PQ5CZ79 823 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 PPP6R3Q5H9R7 873 aaPredicted RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SYPL2Q5VXT5 272 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 ALS2CLQ60I27 953 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 TPGS2Q68CL5 300 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 TTC27Q6P3X3 843 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 DARS2Q6PI48 645 aaKnown RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 C4orf22Q6V702 233 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 DENND5BQ6ZUT9 1274 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 MICAL3Q7RTP6 2002 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 GPRIN1Q7Z2K8 1008 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 PCGF5Q86SE9 256 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 DDX53Q86TM3 631 aaKnown RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 GPR65Q8IYL9 337 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 MAML2Q8IZL2 1156 aaPredicted RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 FIBCD1Q8N539 461 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 LZTR1Q8N653 840 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 NETO2Q8NC67 525 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC35B2Q8TB61 432 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC7A14Q8TBB6 771 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 RSAD2Q8WXG1 361 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 NDRG1Q92597 394 aaKnown RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 RNF34Q969K3 372 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SNF8Q96H20 258 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SPATA17Q96L03 361 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 PEBP4Q96S96 227 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 FERMT1Q9BQL6 677 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 TRIM51Q9BSJ1 452 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 HERC2P3Q9BVR0 1158 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 FUT8Q9BYC5 575 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 RHOBTB2Q9BYZ6 727 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 TRIM31Q9BZY9 425 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 PLEKHA4Q9H4M7 779 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 WDCPQ9H6R7 721 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 FAM204AQ9H8W3 233 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 PCDH18Q9HCL0 1135 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 OLA1Q9NTK5 396 aaKnown RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 DDIT4Q9NX09 232 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 COX16Q9P0S2 106 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 WHRNQ9P202 907 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 HSFX1Q9UBD0 423 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 MTRRQ9UBK8 725 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 ASIC3Q9UHC3 531 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC12A6Q9UHW9 1150 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 FBXW11Q9UKB1 542 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 DNPEPQ9ULA0 475 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 FZD10Q9ULW2 581 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 MAFFQ9ULX9 164 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 NAALADL1Q9UQQ1 740 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SCML2Q9UQR0 700 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SNX24Q9Y343 169 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 BPTFQ12830 3046 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 MYO7AQ13402 2215 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 MTMR11A4FU01 709 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ZSCAN5CA6NGD5 496 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 H7C0C1 242 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SGK1O00141 431 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 MAP2K7O14733 419 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 URODP06132 367 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 FYNP06241 537 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 C8BP07358 591 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 CD48P09326 243 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 MYBL2P10244 700 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 RBP3P10745 1247 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC2A3P11169 496 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 IFNGR1P15260 489 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 CCR1P32246 355 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ELF1P32519 619 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 HTR7P34969 479 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 OR1D2P34982 312 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ADRA1BP35368 520 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ATP5OP48047 213 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 NR2C2P49116 596 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 GLUD2P49448 558 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 CXCR3P49682 368 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 PLTPP55058 493 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 EIF3EP60228 445 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 DYNLT1P63172 113 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ROR1Q01973 937 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 DSG1Q02413 1049 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SCAPQ12770 1279 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 IFRD2Q12894 506 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 MTA1Q13330 715 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 XRCC4Q13426 336 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SLMAPQ14BN4 828 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms