RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 ZSCAN32Q9NX65 697 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 PCYOX1Q9UHG3 505 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 MBD1Q9UIS9 605 aaPredicted RBP11.98□□□□□ -0.49
CUX1-210ENST00000497815 TBC1D3DA0A087WVF3 549 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TBC1D3IA0A087WXS9 549 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TBC1D3EA0A087X179 549 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TBC1D3KA0A087X1G2 549 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 A0A1W2PQ67 120 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 GOLGA6CA6NDK9 693 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 GOLGA6BA6NDN3 693 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TBC1D3FA6NER0 549 aaPredicted RBP11.97□□□□□ -0.49
CUX1-210ENST00000497815 TBC1D3LB9A6J9 549 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TTI1O43156 1089 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 SLC7A4O43246 635 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 HRO43593 1189 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 PLRG1O43660 514 aaKnown RBP11.97□□□□□ -0.49
CUX1-210ENST00000497815 PCDH8O95206 1070 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 SEMA4FO95754 770 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 PRLP01236 227 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 IGLV3-19P01714 112 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TBC1D3HP0C7X1 549 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 PIRTP0C851 137 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 GOLGA6DP0CG33 693 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 FDFT1P37268 417 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 RPL6Q02878 288 aaKnown RBP11.97□□□□□ -0.49
CUX1-210ENST00000497815 SLC14A2Q15849 920 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TBC1D3GQ6DHY5 549 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TBC1D3CQ6IPX1 549 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 CCDC70Q6NSX1 233 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 ERAP2Q6P179 960 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 CEP68Q76N32 757 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 ZNF572Q7Z3I7 529 aaPredicted RBP11.97□□□□□ -0.49
CUX1-210ENST00000497815 JAMLQ86YT9 394 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TBC1D3Q8IZP1 549 aaPredicted RBP11.97□□□□□ -0.49
CUX1-210ENST00000497815 HCAR2Q8TDS4 363 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 PIH1D2Q8WWB5 315 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 GAB3Q8WWW8 586 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 NELL1Q92832 810 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 FEM1CQ96JP0 617 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 PPP1R2P1Q96PQ5 205 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TRIB3Q96RU7 358 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 TRIM51Q9BSJ1 452 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 WRAP53Q9BUR4 548 aaKnown RBP11.97□□□□□ -0.49
CUX1-210ENST00000497815 C6orf106Q9H6K1 298 aaPredicted RBP11.97□□□□□ -0.49
CUX1-210ENST00000497815 SGK2Q9HBY8 427 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 GOLGA6AQ9NYA3 693 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 WSB2Q9NYS7 404 aaPredicted RBP11.97□□□□□ -0.49
CUX1-210ENST00000497815 ASIC3Q9UHC3 531 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 PHTF1Q9UMS5 762 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 NEU2Q9Y3R4 380 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 FADS3Q9Y5Q0 445 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 R4GN57 208 aa11.97□□□□□ -0.49
CUX1-210ENST00000497815 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 A0A0U1RQS6 177 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 LOC285095A0A1B0GVY8 99 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 CTAGE15A4D2H0 777 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 LRRC72A6NJI9 287 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 RIOK3O14730 519 aaKnown RBP11.96□□□□□ -0.49
CUX1-210ENST00000497815 SPINT1O43278 529 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 RNGTTO60942 597 aaKnown RBP11.96□□□□□ -0.49
CUX1-210ENST00000497815 FSBPO95073 299 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 AP2A1O95782 977 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 NDST3O95803 873 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 SLC4A1P02730 911 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 APRTP07741 180 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 CTAGE8P0CG41 777 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 MAT2AP31153 395 aaKnown RBP11.96□□□□□ -0.49
CUX1-210ENST00000497815 HNF1BP35680 557 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 ADCY8P40145 1251 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 GRIA4P48058 902 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 SEMA5AQ13591 1074 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 PTK6Q13882 451 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 DHX34Q14147 1143 aaKnown RBP11.96□□□□□ -0.49
CUX1-210ENST00000497815 QPCTQ16769 361 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 SIRPB2Q5JXA9 342 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 DENND2CQ68D51 928 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 C4orf22Q6V702 233 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 SLC36A4Q6YBV0 504 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 USP45Q70EL2 814 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 ARMCX6Q7L4S7 300 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 CTAGE6Q86UF2 777 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 CTAGE4Q8IX94 777 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 TMEFF1Q8IYR6 380 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 NDUFAF2Q8N183 169 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 ZBTB44Q8NCP5 570 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 MNS1Q8NEH6 495 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 OR2T34Q8NGX1 318 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 KLK6Q92876 244 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 SLCO2A1Q92959 643 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 RAB7BQ96AH8 199 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 FAM131CQ96AQ9 280 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 LRRC45Q96CN5 670 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 TBL1YQ9BQ87 522 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 CARD6Q9BX69 1037 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 TRIM31Q9BZY9 425 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 LRRC40Q9H9A6 602 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 PIH1D1Q9NWS0 290 aaKnown RBP11.96□□□□□ -0.49
CUX1-210ENST00000497815 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.49
CUX1-210ENST00000497815 ARIH1Q9Y4X5 557 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms