RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 K7ERQ8 282 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 HTRA2O43464 458 aaPredicted RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 FZD6O60353 706 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 SIN3BO75182 1162 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 FAM155BO75949 473 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 ERVK-10P10266 1014 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 GDI1P31150 447 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 LTBRP36941 435 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 CTSOP43234 321 aaPredicted RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 STK19P49842 368 aaPredicted RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 POLR2LP62875 67 aaKnown RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 PRAMEP78395 509 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 ACVR1Q04771 509 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 GABPB1Q06547 395 aaPredicted RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 DLX2Q07687 328 aaPredicted RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 MSLNQ13421 630 aaPredicted RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 GEN1Q17RS7 908 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 MYLK3Q32MK0 819 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 ITPRIPL2Q3MIP1 535 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 DGKKQ5KSL6 1271 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 TEDDM1Q5T9Z0 273 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 CES3Q6UWW8 571 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 PACS1Q6VY07 963 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 GLT6D1Q7Z4J2 308 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 RNF135Q8IUD6 432 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 CNTN4Q8IWV2 1026 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 SUGP1Q8IWZ8 645 aaKnown RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 CYP4X1Q8N118 509 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 MICALL1Q8N3F8 863 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 PDCD6IPQ8WUM4 868 aaKnown RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 ASIC4Q96FT7 647 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 RPL10LQ96L21 214 aaKnown RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 TRIM56Q9BRZ2 755 aaKnown RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 OSBPL1AQ9BXW6 950 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 CIPCQ9C0C6 399 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 POMKQ9H5K3 350 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 MAGEE1Q9HCI5 957 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 NKIRAS1Q9NYS0 192 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 CDH22Q9UJ99 828 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 PHTF1Q9UMS5 762 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 PLA2G4CQ9UP65 541 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 PCDHB9Q9Y5E1 797 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 ZNF106Q9H2Y7 1883 aaKnown RBP12.25□□□□□ -0.45
HPS1-213ENST00000497527 TICRRQ7Z2Z1 1910 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 CXorf49A8MYA2 514 aaPredicted RBP12.24□□□□□ -0.45
HPS1-213ENST00000497527 TRIM49D1C9J1S8 452 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 PFDN6O15212 129 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 PRPF4O43172 522 aaKnown RBP eCLIP12.24□□□□□ -0.45
HPS1-213ENST00000497527 LDB2O43679 373 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 ZNF821O75541 412 aaPredicted RBP12.24□□□□□ -0.45
HPS1-213ENST00000497527 GJB3O75712 270 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 RPP40O75818 363 aaKnown RBP12.24□□□□□ -0.45
HPS1-213ENST00000497527 VAPBO95292 243 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 PRLP01236 227 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 LPOP22079 712 aaPredicted RBP12.24□□□□□ -0.45
HPS1-213ENST00000497527 POLD2P49005 469 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 CCNHP51946 323 aaPredicted RBP12.24□□□□□ -0.45
HPS1-213ENST00000497527 CNGA3Q16281 694 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 QPCTQ16769 361 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 CHD9Q3L8U1 2897 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 HSP90AA5PQ58FG0 334 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 ESRP1Q6NXG1 681 aaKnown RBP12.24□□□□□ -0.45
HPS1-213ENST00000497527 TIFABQ6ZNK6 161 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 GALNT7Q86SF2 657 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 TERB1Q8NA31 727 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 HCAR2Q8TDS4 363 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 ACMSDQ8TDX5 336 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 CSGALNACT1Q8TDX6 532 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 MZB1Q8WU39 189 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 SUSD6Q92537 303 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 PTPRN2Q92932 1015 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 SGSM3Q96HU1 749 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 ZFYVE19Q96K21 471 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 CABS1Q96KC9 395 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 RBBP8Q99708 897 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 KXD1Q9BQD3 176 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 HEPHQ9BQS7 1158 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 CAPS2Q9BXY5 557 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 TNKS2Q9H2K2 1166 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 MFSD1Q9H3U5 465 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 SUV39H2Q9H5I1 410 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 BRD9Q9H8M2 597 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 KCNK9Q9NPC2 374 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 IARS2Q9NSE4 1012 aaKnown RBP12.24□□□□□ -0.45
HPS1-213ENST00000497527 ELOVL2Q9NXB9 296 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 PSD3Q9NYI0 1048 aa12.24□□□□□ -0.45
HPS1-213ENST00000497527 USP15Q9Y4E8 981 aaPredicted RBP12.24□□□□□ -0.45
HPS1-213ENST00000497527 SCN8AQ9UQD0 1980 aa12.23□□□□□ -0.45
HPS1-213ENST00000497527 MUC22E2RYF6 1773 aaPredicted RBP12.23□□□□□ -0.45
HPS1-213ENST00000497527 CHD7Q9P2D1 2997 aa12.23□□□□□ -0.45
HPS1-213ENST00000497527 TRANK1O15050 2925 aa12.23□□□□□ -0.45
HPS1-213ENST00000497527 A0A0J9YYE9 177 aa12.23□□□□□ -0.45
HPS1-213ENST00000497527 FAM47DPA6NHR8 397 aa12.23□□□□□ -0.45
HPS1-213ENST00000497527 TRAFD1O14545 582 aaPredicted RBP12.23□□□□□ -0.45
HPS1-213ENST00000497527 NPC1O15118 1278 aa12.23□□□□□ -0.45
HPS1-213ENST00000497527 STX7O15400 261 aaKnown RBP12.23□□□□□ -0.45
HPS1-213ENST00000497527 ZWINTO95229 277 aa12.23□□□□□ -0.45
HPS1-213ENST00000497527 TRBC1P01850 177 aa12.23□□□□□ -0.45
HPS1-213ENST00000497527 APODP05090 189 aa12.23□□□□□ -0.45
HPS1-213ENST00000497527 ITGA2BP08514 1039 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms