RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	MAN2A1	Q16706	1144 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	EXOC3L4	Q17RC7	722 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	POM121L1P	Q3SYA9	428 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	SYCP2L	Q5T4T6	812 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	LCE3B	Q5TA77	95 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	FAM72A	Q5TYM5	149 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	FAM72D	Q6L9T8	149 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	GBP6	Q6ZN66	633 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	GCNT7	Q6ZNI0	430 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	C11orf57	Q6ZUT1	292 aa	Predicted RBP	5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	ENOSF1	Q7L5Y1	443 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	TMPRSS7	Q7RTY8	843 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	FAM72B	Q86X60	149 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	SLC22A18AS	Q8N1D0	253 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	SH2D3C	Q8N5H7	860 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	TMEM145	Q8NBT3	493 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	OR7D4	Q8NG98	312 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	OR2T34	Q8NGX1	318 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	JOSD2	Q8TAC2	188 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	GPT2	Q8TD30	523 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	SAP25	Q8TEE9	199 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	PGAP3	Q96FM1	320 aa	Predicted RBP	5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	COX4I2	Q96KJ9	171 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	PPP1R13B	Q96KQ4	1090 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	NOX5	Q96PH1	765 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	PCDHB18P	Q96TA0	734 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	FEM1A	Q9BSK4	669 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	SYT11	Q9BT88	431 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	SLC32A1	Q9H598	525 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	NOL6	Q9H6R4	1146 aa	Known RBP	5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	FAM204A	Q9H8W3	233 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	UBP1	Q9NZI7	540 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	COX16	Q9P0S2	106 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	VPS51	Q9UID3	782 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	HS3ST2	Q9Y278	367 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	SIK3	Q9Y2K2	1263 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	PCDHB14	Q9Y5E9	798 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	RP1	P56715	2156 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	SHROOM3	Q8TF72	1996 aa		5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368	FASN	P49327	2511 aa	Known RBP	5.64	□□□□□ -1.51
UBE3C-208	ENST00000497368		A0A1W2PNU3	283 aa	Predicted RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	TARSL2	A2RTX5	802 aa	Known RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	DRGX	A6NNA5	263 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368		F5H5T6	163 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368		M0QYT0	321 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	RAD51B	O15315	384 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	FLRT2	O43155	660 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	TLX3	O43711	291 aa	Predicted RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	RNASEH2A	O75792	299 aa	Known RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	ENDOD1	O94919	500 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	APOE	P02649	317 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	CYP1A1	P04798	512 aa	Predicted RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	ATP5B	P06576	529 aa	Known RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	MME	P08473	750 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	ACADM	P11310	421 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	CYP11B1	P15538	503 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	GNS	P15586	552 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	GOT1	P17174	413 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	RRM1	P23921	792 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	SULT1E1	P49888	294 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	CCT8	P50990	548 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	ATXN3	P54252	364 aa	Predicted RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	RACK1	P63244	317 aa	Known RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	BECN1	Q14457	450 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	ELAVL3	Q14576	367 aa	Known RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	DRAP1	Q14919	205 aa	Predicted RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	NCAPH	Q15003	741 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	SMAD1	Q15797	465 aa	Known RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	C15orf59	Q2T9L4	293 aa	Predicted RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	ZNF284	Q2VY69	593 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	TTC31	Q49AM3	519 aa	Predicted RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	VWA3B	Q502W6	1294 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	KLHDC7A	Q5VTJ3	777 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	TAF3	Q5VWG9	929 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	E4F1	Q66K89	784 aa	Predicted RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	OR6B2	Q6IFH4	312 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	C22orf39	Q6P5X5	142 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	DHRS13	Q6UX07	377 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	LINGO4	Q6UY18	593 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	ATG4D	Q86TL0	474 aa	Predicted RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	NLRP14	Q86W24	1093 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	TRIM69	Q86WT6	500 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	PHACTR4	Q8IZ21	702 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	EMC1	Q8N766	993 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	ATP6V0D2	Q8N8Y2	350 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	OR2A12	Q8NGT7	310 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	PIP4K2C	Q8TBX8	421 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	GOLGA1	Q92805	767 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	NSMCE3	Q96MG7	304 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	CFAP57	Q96MR6	1250 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	ELF4	Q99607	663 aa	Predicted RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	KLC2	Q9H0B6	622 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	TKTL2	Q9H0I9	626 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	NDST4	Q9H3R1	872 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	FZD3	Q9NPG1	666 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	LMBRD1	Q9NUN5	540 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	TAB2	Q9NYJ8	693 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	MPP6	Q9NZW5	540 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	KIAA1522	Q9P206	1035 aa	Predicted RBP	5.63	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms