RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 LMLNQ96KR4 655 aa3.88□□□□□ -1.79
CD46-218ENST00000496723 LRFN5Q96NI6 719 aa3.88□□□□□ -1.79
CD46-218ENST00000496723 SIN3AQ96ST3 1273 aa3.88□□□□□ -1.79
CD46-218ENST00000496723 MPHOSPH8Q99549 860 aa3.88□□□□□ -1.79
CD46-218ENST00000496723 LBHD1Q9BQE6 289 aaPredicted RBP3.88□□□□□ -1.79
CD46-218ENST00000496723 MXRA8Q9BRK3 442 aa3.88□□□□□ -1.79
CD46-218ENST00000496723 SLC25A10Q9UBX3 287 aaPredicted RBP3.88□□□□□ -1.79
CD46-218ENST00000496723 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.88□□□□□ -1.79
CD46-218ENST00000496723 PCDHGB1Q9Y5G3 927 aa3.88□□□□□ -1.79
CD46-218ENST00000496723 TEX13CA0A0J9YWL9 993 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 A0A0U1RQJ8 604 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 MTA2O94776 668 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 GAS8-AS1O95177 125 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 XBP1P17861 261 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 EFNA5P52803 228 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 UFM1P61960 85 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 TUBA1BP68363 451 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 DDR1Q08345 913 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 XKR9Q5GH70 373 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 NEK10Q6ZWH5 1172 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 H1FNTQ75WM6 255 aaPredicted RBP3.87□□□□□ -1.79
CD46-218ENST00000496723 RRM2BQ7LG56 351 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 C16orf82Q7Z2V1 217 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 ARMC9Q7Z3E5 817 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 NOXA1Q86UR1 476 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 EXOC8Q8IYI6 725 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 HTRA1Q92743 480 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 SNAPC3Q92966 411 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 ERGIC1Q969X5 290 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 BBS4Q96RK4 519 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 IL25Q9H293 177 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 SMYD2Q9NRG4 433 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 C20orf141Q9NUB4 165 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 CISD1Q9NZ45 108 aaKnown RBP3.87□□□□□ -1.79
CD46-218ENST00000496723 HSPB7Q9UBY9 170 aa3.87□□□□□ -1.79
CD46-218ENST00000496723 hDV102S1A0JD36 115 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 BTBD18B2RXH4 712 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 TSPAN4O14817 238 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 HSPA12AO43301 675 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 KLK8O60259 260 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 NDUFB4O95168 129 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 PPP1R3DO95685 299 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 HEXAP06865 529 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 RRP1P56182 461 aaKnown RBP3.86□□□□□ -1.79
CD46-218ENST00000496723 GRIK3Q13003 919 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 MYBPHQ13203 477 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 DHX34Q14147 1143 aaKnown RBP3.86□□□□□ -1.79
CD46-218ENST00000496723 SLC39A14Q15043 492 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 GORABQ5T7V8 394 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 C9orf57Q5W0N0 161 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 CPLX2Q6PUV4 134 aaKnown RBP3.86□□□□□ -1.79
CD46-218ENST00000496723 ZC3HC1Q86WB0 502 aaKnown RBP3.86□□□□□ -1.79
CD46-218ENST00000496723 NR2C2APQ86WQ0 139 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 PGBD5Q8N414 524 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 ESX1Q8N693 406 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 KIF1BPQ96EK5 621 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 MMTAG2Q9BU76 263 aaKnown RBP3.86□□□□□ -1.79
CD46-218ENST00000496723 FAM96BQ9Y3D0 163 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 NFE2L3Q9Y4A8 694 aa3.86□□□□□ -1.79
CD46-218ENST00000496723 CCDC196A0A1B0GTZ2 297 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 SRRM3A6NNA2 597 aaPredicted RBP3.85□□□□□ -1.79
CD46-218ENST00000496723 BCAT2O15382 392 aaPredicted RBP3.85□□□□□ -1.79
CD46-218ENST00000496723 ZIC3O60481 467 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 ETFAP13804 333 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 COX7A2P14406 83 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 ITGAXP20702 1163 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 CHATP28329 748 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 SSTR2P30874 369 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 PAFAH1B1P43034 410 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 PEX5P50542 639 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 TUBP50607 506 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 PPP2R5BQ15173 497 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 SF3B4Q15427 424 aaKnown RBP eCLIP3.85□□□□□ -1.793e-11■■■■■ 51.5
CD46-218ENST00000496723 BAK1Q16611 211 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 HIST2H2ACQ16777 129 aaPredicted RBP3.85□□□□□ -1.79
CD46-218ENST00000496723 SLC9B1Q4ZJI4 515 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 SLC9C2Q5TAH2 1124 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 FAM69BQ5VUD6 431 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 RHBDF2Q6PJF5 856 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.85□□□□□ -1.79
CD46-218ENST00000496723 TDRPQ86YL5 185 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 DHX40Q8IX18 779 aaKnown RBP3.85□□□□□ -1.79
CD46-218ENST00000496723 ZCCHC9Q8N567 271 aaKnown RBP3.85□□□□□ -1.79
CD46-218ENST00000496723 LILRB1Q8NHL6 650 aaPredicted RBP3.85□□□□□ -1.79
CD46-218ENST00000496723 MTBPQ96DY7 904 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 RNF125Q96EQ8 232 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 WBP1Q96G27 269 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 KLHL15Q96M94 604 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 ZNF570Q96NI8 536 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 C1QTNF4Q9BXJ3 329 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 VEZTQ9HBM0 779 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 WASH6PQ9NQA3 447 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 PPP1R14DQ9NXH3 145 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 SLC13A4Q9UKG4 626 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 GJD2Q9UKL4 321 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 CDC14AQ9UNH5 594 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 NFS1Q9Y697 457 aa3.85□□□□□ -1.79
CD46-218ENST00000496723 IGLV5-37A0A075B6J1 123 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 PLSCR5A0PG75 271 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 WNT9BO14905 357 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms