RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SLC1A5Q15758 541 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 RANBP10Q6VN20 620 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.9■■□□□ 1.1
C9orf3-222ENST00000496567 ZSWIM9Q86XI8 627 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 LPCAT1Q8NF37 534 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 FAM131CQ96AQ9 280 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 TPSD1Q9BZJ3 242 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 TPX2Q9ULW0 747 aaKnown RBP21.9■■□□□ 1.1
C9orf3-222ENST00000496567 PPIL1Q9Y3C6 166 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 ANKRD66B4E2M5 251 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 DNALI1O14645 258 aaPredicted RBP21.89■■□□□ 1.09
C9orf3-222ENST00000496567 AGTP01019 485 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 IGLV3-19P01714 112 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 OXTRP30559 389 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 SARNPP82979 210 aaKnown RBP21.89■■□□□ 1.09
C9orf3-222ENST00000496567 SPARCL1Q14515 664 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 KCNJ11Q14654 390 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 SYCP2LQ5T4T6 812 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 PIP5KL1Q5T9C9 394 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 ERAP2Q6P179 960 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 PPIL6Q8IXY8 311 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 MAML2Q8IZL2 1156 aaPredicted RBP21.89■■□□□ 1.09
C9orf3-222ENST00000496567 BBOF1Q8ND07 529 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 CPT1BQ92523 772 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 SNF8Q96H20 258 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 TRIM31Q9BZY9 425 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 NEUROG2Q9H2A3 272 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 SERGEFQ9UGK8 458 aa21.89■■□□□ 1.09
C9orf3-222ENST00000496567 PLK4O00444 970 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 SLU7O95391 586 aaKnown RBP21.88■■□□□ 1.09
C9orf3-222ENST00000496567 FGF1P05230 155 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 TDGF1P13385 188 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 IVDP26440 423 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 TERF1P54274 439 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 ELP6Q0PNE2 266 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 GALNT3Q14435 633 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 AGBL4Q5VU57 503 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 IZUMO3Q5VZ72 239 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 TSSK4Q6SA08 328 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 USP45Q70EL2 814 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 SCRN2Q96FV2 425 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 FAM126AQ9BYI3 521 aaPredicted RBP21.88■■□□□ 1.09
C9orf3-222ENST00000496567 ARNT2Q9HBZ2 717 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 CACNA1IQ9P0X4 2223 aa21.88■■□□□ 1.09
C9orf3-222ENST00000496567 A0A0J9YYE9 177 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 SMAPO00193 183 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 TRBC1P01850 177 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 ATXN1LP0C7T5 689 aaKnown RBP21.87■■□□□ 1.09
C9orf3-222ENST00000496567 TUBB4BP68371 445 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 QPCTQ16769 361 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 USP39Q53GS9 565 aaKnown RBP21.87■■□□□ 1.09
C9orf3-222ENST00000496567 SIRPB2Q5JXA9 342 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 DUPD1Q68J44 220 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 PPP1R21Q6ZMI0 780 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 HOOK3Q86VS8 718 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 SLC25A41Q8N5S1 370 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 SRPK1Q96SB4 655 aaKnown RBP21.87■■□□□ 1.09
C9orf3-222ENST00000496567 BTBD1Q9H0C5 482 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 SGK2Q9HBY8 427 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 CYP8B1Q9UNU6 501 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 SNX24Q9Y343 169 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 AP3B1O00203 1094 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 AP1G1O43747 822 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 USP12O75317 370 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 SEC31AO94979 1220 aaKnown RBP21.87■■□□□ 1.09
C9orf3-222ENST00000496567 HEXIM1O94992 359 aaKnown RBP21.87■■□□□ 1.09
C9orf3-222ENST00000496567 CYP2A6P11509 494 aaPredicted RBP21.87■■□□□ 1.09
C9orf3-222ENST00000496567 ITIH2P19823 946 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 SLC7A5Q01650 507 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 CALCOCO2Q13137 446 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 RNASEH2BQ5TBB1 312 aaKnown RBP21.87■■□□□ 1.09
C9orf3-222ENST00000496567 WDR5BQ86VZ2 330 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 OR14C36Q8NHC7 312 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 MCCC1Q96RQ3 725 aaPredicted RBP21.87■■□□□ 1.09
C9orf3-222ENST00000496567 APOL2Q9BQE5 337 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 KDM4CQ9H3R0 1056 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 PCDH12Q9NPG4 1184 aa21.87■■□□□ 1.09
C9orf3-222ENST00000496567 KMT2EQ8IZD2 1858 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 RIOK3O14730 519 aaKnown RBP21.86■■□□□ 1.09
C9orf3-222ENST00000496567 PLRG1O43660 514 aaKnown RBP21.86■■□□□ 1.09
C9orf3-222ENST00000496567 ABL2P42684 1182 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 CHRNA4P43681 627 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 RPL21P46778 160 aaKnown RBP21.86■■□□□ 1.09
C9orf3-222ENST00000496567 DRG2P55039 364 aaKnown RBP21.86■■□□□ 1.09
C9orf3-222ENST00000496567 FAM193AP78312 1265 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 CDH17Q12864 832 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 OLIG2Q13516 323 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 MORF4L2Q15014 288 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 ZNF528Q3MIS6 628 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 FAM124AQ86V42 546 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 LONP2Q86WA8 852 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 NAT8LQ8N9F0 302 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 DNAAF3Q8N9W5 541 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 MCUQ8NE86 351 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 SPACA7Q96KW9 195 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 DPH5Q9H2P9 285 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 WHRNQ9P202 907 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 FADS3Q9Y5Q0 445 aa21.86■■□□□ 1.09
C9orf3-222ENST00000496567 TCRBV7S3A2A0A539 114 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 CAPN8A6NHC0 703 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms