RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 TEX26Q8N6G2 289 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 FATE1Q969F0 183 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 CNDP2Q96KP4 475 aaKnown RBP17.17■□□□□ 0.34
COMMD3-214ENST00000496071 TSGA13Q96PP4 275 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 RNF157Q96PX1 679 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 AMACRQ9UHK6 382 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 PCDHGA1Q9Y5H4 931 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 LRRK1Q38SD2 2015 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 TDRD6O60522 2096 aaKnown RBP17.16■□□□□ 0.34
COMMD3-214ENST00000496071 LRRD1A4D1F6 860 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 NEMP2A6NFY4 417 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 GOLGA8CPA6NN73 597 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 H3BM21 787 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 MATN3O15232 486 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 HTRA2O43464 458 aaPredicted RBP17.16■□□□□ 0.34
COMMD3-214ENST00000496071 LZTS3O60299 673 aaPredicted RBP17.16■□□□□ 0.34
COMMD3-214ENST00000496071 SDC3O75056 442 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 PIAS2O75928 621 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 C1SP09871 688 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 C6P13671 934 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 CES1P23141 567 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 DGKAP23743 735 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 IGFALSP35858 605 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 LIG3P49916 1009 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 HADHBP55084 474 aaKnown RBP17.16■□□□□ 0.34
COMMD3-214ENST00000496071 PDE1CQ14123 709 aaPredicted RBP17.16■□□□□ 0.34
COMMD3-214ENST00000496071 FZD2Q14332 565 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 LRRC14Q15048 493 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 SPA17Q15506 151 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 RHOT1Q8IXI2 618 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 TP53I13Q8NBR0 393 aaPredicted RBP17.16■□□□□ 0.34
COMMD3-214ENST00000496071 BTN2A2Q8WVV5 523 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 RAPGEF5Q92565 580 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 PANX2Q96RD6 677 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 MAK16Q9BXY0 300 aaKnown RBP17.16■□□□□ 0.34
COMMD3-214ENST00000496071 DNAJC28Q9NX36 388 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 DDX56Q9NY93 547 aaKnown RBP17.16■□□□□ 0.34
COMMD3-214ENST00000496071 KLK13Q9UKR3 277 aa17.16■□□□□ 0.34
COMMD3-214ENST00000496071 CSF2P04141 144 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 ALPPL2P10696 532 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 NOP2P46087 812 aaKnown RBP17.15■□□□□ 0.34
COMMD3-214ENST00000496071 PEX5P50542 639 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 ZNF211Q13398 564 aaPredicted RBP17.15■□□□□ 0.34
COMMD3-214ENST00000496071 DPPA4Q7L190 304 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 GALNT15Q8N3T1 639 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 SLC25A45Q8N413 288 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 PQLC3Q8N755 202 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.15■□□□□ 0.34
COMMD3-214ENST00000496071 MAML1Q92585 1016 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 ZNF830Q96NB3 372 aaPredicted RBP17.15■□□□□ 0.34
COMMD3-214ENST00000496071 POLR1EQ9GZS1 481 aaKnown RBP17.15■□□□□ 0.34
COMMD3-214ENST00000496071 NOD2Q9HC29 1040 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 NT5MQ9NPB1 228 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 MBNL1Q9NR56 388 aaKnown RBP17.15■□□□□ 0.34
COMMD3-214ENST00000496071 PHTF1Q9UMS5 762 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 COQ6Q9Y2Z9 468 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 PCDHGC4Q9Y5F7 938 aa17.15■□□□□ 0.34
COMMD3-214ENST00000496071 TTC24A2A3L6 582 aaPredicted RBP17.14■□□□□ 0.33
COMMD3-214ENST00000496071 SPOPO43791 374 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 NEBLO76041 1014 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 CPP00450 1065 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 NME1P15531 152 aaKnown RBP17.14■□□□□ 0.33
COMMD3-214ENST00000496071 ZFXP17010 805 aaPredicted RBP17.14■□□□□ 0.33
COMMD3-214ENST00000496071 MAXP61244 160 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 ITKQ08881 620 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 UNQ6494/PRO21346Q6UXR6 183 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 LIPIQ6XZB0 460 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 TMPRSS7Q7RTY8 843 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 TMTC1Q8IUR5 882 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 NDUFAF2Q8N183 169 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 OR4C6Q8NH72 309 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 PDCD6IPQ8WUM4 868 aaKnown RBP17.14■□□□□ 0.33
COMMD3-214ENST00000496071 HDAC11Q96DB2 347 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 NSMCE3Q96MG7 304 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 KCTD5Q9NXV2 234 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 PCDHA13Q9Y5I0 950 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 CSNK1G3Q9Y6M4 447 aa17.14■□□□□ 0.33
COMMD3-214ENST00000496071 PTPRBP23467 1997 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 A0A0A6YYK5 440 aaPredicted RBP17.13■□□□□ 0.33
COMMD3-214ENST00000496071 SCAMP1O15126 338 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 IPO7O95373 1038 aaKnown RBP17.13■□□□□ 0.33
COMMD3-214ENST00000496071 KRT1P04264 644 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 PRKCGP05129 697 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 PROS1P07225 676 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 ELFN1P0C7U0 828 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 CYP2A6P11509 494 aaPredicted RBP17.13■□□□□ 0.33
COMMD3-214ENST00000496071 KRT10P13645 584 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 CCNB1P14635 433 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 CKMT2P17540 419 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 COMTP21964 271 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 GBE1Q04446 702 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 SLC10A2Q12908 348 aaPredicted RBP17.13■□□□□ 0.33
COMMD3-214ENST00000496071 RALGDSQ12967 914 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 ILKQ13418 452 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 IRF4Q15306 451 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 WSCD2Q2TBF2 565 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 ZNF542PQ5EBM4 170 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 ARMC12Q5T9G4 340 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 SLC9A4Q6AI14 798 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 ALG1LQ6GMV1 187 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms