RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 PRLRP16471 622 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 CDKN2BP42772 138 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 NAP1L1P55209 391 aaKnown RBP12.47□□□□□ -0.41
MRPL55-233ENST00000495899 PDK1Q15118 436 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 PPM1JQ5JR12 505 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 THSD4Q6ZMP0 1018 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 KIAA1328Q86T90 577 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 DCP2Q8IU60 420 aaKnown RBP12.47□□□□□ -0.41
MRPL55-233ENST00000495899 PGBD5Q8N414 524 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 OXR1Q8N573 874 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 CCNYQ8ND76 341 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 EXD1Q8NHP7 514 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 CXorf40AQ8TE69 158 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 KCTD12Q96CX2 325 aaKnown RBP12.47□□□□□ -0.41
MRPL55-233ENST00000495899 KLHDC7BQ96G42 594 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 ELF4Q99607 663 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-233ENST00000495899 C1QTNF7Q9BXJ2 289 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 POLR1EQ9GZS1 481 aaKnown RBP12.47□□□□□ -0.41
MRPL55-233ENST00000495899 IL21RQ9HBE5 538 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 NOD2Q9HC29 1040 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 FNDC3AQ9Y2H6 1198 aaKnown RBP12.47□□□□□ -0.41
MRPL55-233ENST00000495899 HEY1Q9Y5J3 304 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 GON4LQ3T8J9 2241 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 PCDH15Q96QU1 1955 aa12.47□□□□□ -0.41
MRPL55-233ENST00000495899 NYNRINQ9P2P1 1898 aaKnown RBP12.46□□□□□ -0.41
MRPL55-233ENST00000495899 NUMA1Q14980 2115 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 A0A1B0GTQ1 180 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 CCDC66A2RUB6 948 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 H0Y8X5 98 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 HTRA2O43464 458 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-233ENST00000495899 NFKBIAP25963 317 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 CTNNA1P35221 906 aaKnown RBP12.46□□□□□ -0.41
MRPL55-233ENST00000495899 RXRGP48443 463 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 ARRB1P49407 418 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-233ENST00000495899 CCT8P50990 548 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 COPS2P61201 443 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 PPIDQ08752 370 aaKnown RBP12.46□□□□□ -0.41
MRPL55-233ENST00000495899 FGL2Q14314 439 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 TFDP3Q5H9I0 405 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 ALG1LQ6GMV1 187 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 LAYNQ6UX15 382 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 MFSD7Q6UXD7 560 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 SPOCD1Q6ZMY3 1216 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 ABI3BPQ7Z7G0 1075 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 RFX6Q8HWS3 928 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 CCDC13Q8IYE1 715 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 ACRBPQ8NEB7 543 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 DENND6BQ8NEG7 585 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 UBE2Q2Q8WVN8 375 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 KLK6Q92876 244 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 CENPTQ96BT3 561 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 RBM41Q96IZ5 413 aaKnown RBP12.46□□□□□ -0.41
MRPL55-233ENST00000495899 OLFM3Q96PB7 478 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 GOLPH3Q9H4A6 298 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 NT5MQ9NPB1 228 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 PCDH12Q9NPG4 1184 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 RBM22Q9NW64 420 aaKnown RBP eCLIP12.46□□□□□ -0.41
MRPL55-233ENST00000495899 GGT7Q9UJ14 662 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 ITM2BQ9Y287 266 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 EFR3BQ9Y2G0 817 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 PCDHA3Q9Y5H8 950 aa12.46□□□□□ -0.41
MRPL55-233ENST00000495899 CACNA1AO00555 2505 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 A6NNZ2 444 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 KCNK3O14649 394 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 TOR1BO14657 336 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 FPGTO14772 594 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 PPP1R12AO14974 1030 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-233ENST00000495899 FLRT2O43155 660 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 MMP20O60882 483 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 NEBLO76041 1014 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 TM7SF2O76062 418 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 THEGLP0DJG4 465 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 TGM2P21980 687 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 MMP12P39900 470 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 NOVA1P51513 510 aaKnown RBP12.45□□□□□ -0.42
MRPL55-233ENST00000495899 IFI35P80217 286 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-233ENST00000495899 AGERQ15109 404 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 PPP2R5EQ16537 467 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 GCNT7Q6ZNI0 430 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 ZSWIM9Q86XI8 627 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 SPATS2Q86XZ4 545 aaKnown RBP12.45□□□□□ -0.42
MRPL55-233ENST00000495899 NAXDQ8IW45 347 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 SYCE1Q8N0S2 351 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 RNF10Q8N5U6 811 aaKnown RBP12.45□□□□□ -0.42
MRPL55-233ENST00000495899 PAF1Q8N7H5 531 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 LRRC57Q8N9N7 239 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 CCDC112Q8NEF3 446 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 IFT43Q96FT9 208 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 BMFQ96LC9 184 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 NSMCE3Q96MG7 304 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 LGMNQ99538 433 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 KLF6Q99612 283 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-233ENST00000495899 SEMA3CQ99985 751 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 PHTF1Q9UMS5 762 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 PCDHGC4Q9Y5F7 938 aa12.45□□□□□ -0.42
MRPL55-233ENST00000495899 TTC24A2A3L6 582 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-233ENST00000495899 ARHGAP6O43182 974 aa12.44□□□□□ -0.42
MRPL55-233ENST00000495899 SH3BP5O60239 455 aa12.44□□□□□ -0.42
MRPL55-233ENST00000495899 CST8O60676 142 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms